Top 10 genes with highest correlation to Rv0259c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0060/- | (cc=0.4823) | info on Rv0060/- |
| Rv1805c/- | (cc=0.4463) | info on Rv1805c/- |
| Rv0445c/sigK | (cc=0.4419) | info on Rv0445c/sigK |
| Rv0314c/- | (cc=0.437) | info on Rv0314c/- |
| Rv3843c/- | (cc=0.4333) | info on Rv3843c/- |
| Rv2675c/- | (cc=0.4189) | info on Rv2675c/- |
| Rv3774/echA21 | (cc=0.4108) | info on Rv3774/echA21 |
| Rv2322c/rocD1 | (cc=0.4069) | info on Rv2322c/rocD1 |
| Rv0604/lpqO | (cc=0.3989) | info on Rv0604/lpqO |
| Rv3282/- | (cc=0.3959) | info on Rv3282/- |
Correlation of Rv0259c/- with Rv3282/-
Normalized LFCs for Rv0259c/-:
(description and provenance of datasets)
| Rv0259c/- | Rv3282/- | |
| Fe_supp_jason_reseq | 0.702 | 0.633 |
| low_pH_jason_reseq | -2.28 | -0.793 |
| NO_jason_reseq | 0.205 | -0.155 |
| B6_jason_reseq | 1.744 | 1.044 |
| MHCII_jason_reseq | 1.323 | 1.491 |
| Isoniazid02 | -0.541 | -0.383 |
| Rifampicin4 | -2.366 | 0.108 |
| Ethambutol3 | -0.731 | -0.207 |
| Meropenem3 | -1.047 | -0.315 |
| Vancomycin16 | -1.34 | 0.207 |
| Rv2680_day32 | 0.136 | 0.131 |
| H37Rv_KO_MarP | 0.087 | -0.199 |
| hypoxia_3wks | 0.586 | -0.439 |
| hypoxia_6wks | 1.023 | -1.044 |
| glycerol | 0.832 | 0.69 |
| cholesterol | -0.387 | 1.121 |
| AJ | -0.039 | 1.758 |
| Bibs02 | 0.415 | -0.935 |
| Bibs02c | 0.741 | 1.332 |
| BL6 | 0.502 | 0.266 |
| BL6a | 0.702 | 0.191 |
| BXD01 | 0.624 | 0.853 |
| BXD010 | -1.112 | 0.374 |
| BXD011 | -0.286 | -0.34 |
| BXD03 | -0.071 | 0.088 |
| BXD04 | -0.414 | 0.157 |
| BXD05 | -0.33 | 0.585 |
| BXD06 | -0.758 | 0.0 |
| BXD07 | 0.237 | 0.09 |
| BXD08 | -0.609 | 0.246 |
| BXD09 | -0.316 | 0.135 |
| CAST | 1.291 | 0.292 |
| CCcont | 1.018 | 0.923 |
| DS01 | -0.08 | 1.181 |
| DS02 | -0.232 | -0.314 |
| DS04 | 0.187 | 1.088 |
| DS0c | -1.43 | -0.231 |
| GP01 | -0.897 | -0.62 |
| GP02 | -1.075 | -0.825 |
| GP0c | -0.187 | -0.044 |
| NOD | -0.037 | 1.168 |
| NZO | 1.037 | -0.367 |
| PWK | 0.897 | 1.319 |
| H37Rv_KO_CtpC | 0.08 | 0.706 |
| H37Rv_KO_CtpD | 0.0 | -0.284 |
| H37Rv_KO_Rv1272 | -1.667 | -0.646 |
| H37Rv_KO_SugABC | -0.309 | -0.622 |
| H37Rv_KO_MbtN | -0.345 | -0.782 |
| Trans05 | -0.164 | 0.758 |
| macrophage_unactivated | 1.111 | 0.552 |
| IL1 | -0.092 | -1.468 |
| Rapamycin | -0.193 | -1.519 |
| Tcell | 1.45 | -1.01 |
| GMCSF | -0.338 | -0.671 |
| IFNab | -1.164 | 0.139 |
| IFNg | -0.342 | -1.502 |
| IFNg_GMCSF1 | -0.299 | 0.283 |
| Rv1432_day32 | 0.575 | -0.827 |
| Rv1565c_day32 | -1.339 | -0.218 |
| secA2_input | 0.554 | 0.515 |
| delta_Rv3594 | -0.965 | 0.0 |
| delta_Rv3717 | 0.618 | -1.212 |
| delta_Rv3811 | -0.17 | 0.532 |
| delta_Rv0954 | -1.008 | -0.83 |
| PonA1 | -1.984 | -0.741 |
| EccD1_KO | -0.194 | -0.687 |
| EspI_KO | -0.667 | -1.184 |
| PE35_KO | -1.21 | -1.321 |
| PPE68_KO | -0.486 | -0.467 |
| glycerol2 | 0.943 | 1.473 |
| lignocerate | 1.206 | 1.593 |
| oleate | 0.054 | 0.763 |
| phosphatidylcholine | 1.154 | 1.494 |
| acetate | 0.906 | 1.327 |
| glucAc | 1.902 | 1.186 |
| Rv0950ko | 0.908 | 0.371 |
| Rv1096ko | -0.127 | 0.19 |
| Rv3684ko | 0.517 | -0.675 |
| delta_otsA_trehalose | 0.578 | -1.241 |