Top 10 genes with highest correlation to Rv0257/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0256c/PPE2 | (cc=0.5229) | info on Rv0256c/PPE2 |
| Rv1492/mutA | (cc=0.5082) | info on Rv1492/mutA |
| Rv1314c/- | (cc=0.4514) | info on Rv1314c/- |
| Rv2820c/- | (cc=0.4502) | info on Rv2820c/- |
| Rv2977c/thiL | (cc=0.437) | info on Rv2977c/thiL |
| Rv1319c/- | (cc=0.421) | info on Rv1319c/- |
| Rv1493/mutB | (cc=0.4088) | info on Rv1493/mutB |
| Rv1065/- | (cc=0.4055) | info on Rv1065/- |
| Rv3290c/lat | (cc=0.3886) | info on Rv3290c/lat |
| Rv0959/- | (cc=0.3884) | info on Rv0959/- |
Correlation of Rv0257/- with Rv2820c/-
Normalized LFCs for Rv0257/-:
(description and provenance of datasets)
| Rv0257/- | Rv2820c/- | |
| Fe_supp_jason_reseq | -0.2 | 0.633 |
| low_pH_jason_reseq | 0.174 | 0.42 |
| NO_jason_reseq | 0.105 | 0.257 |
| B6_jason_reseq | -1.556 | 0.456 |
| MHCII_jason_reseq | -0.692 | -0.014 |
| Isoniazid02 | 0.096 | 1.772 |
| Rifampicin4 | 0.382 | 0.076 |
| Ethambutol3 | 3.694 | 2.23 |
| Meropenem3 | 0.695 | -0.125 |
| Vancomycin16 | 0.072 | 0.496 |
| Rv2680_day32 | -0.475 | -0.012 |
| H37Rv_KO_MarP | -0.684 | -0.474 |
| hypoxia_3wks | 0.634 | 0.419 |
| hypoxia_6wks | -0.906 | -0.021 |
| glycerol | -0.366 | -0.162 |
| cholesterol | -0.313 | -0.597 |
| AJ | -0.237 | 0.173 |
| Bibs02 | 0.536 | 0.518 |
| Bibs02c | -0.558 | -0.447 |
| BL6 | -1.268 | 0.324 |
| BL6a | -0.228 | -0.443 |
| BXD01 | -0.015 | -0.021 |
| BXD010 | -1.134 | -1.021 |
| BXD011 | -0.511 | -0.124 |
| BXD03 | 0.653 | -0.869 |
| BXD04 | -0.723 | 0.019 |
| BXD05 | -1.515 | -0.494 |
| BXD06 | -0.768 | -0.064 |
| BXD07 | -1.245 | -0.207 |
| BXD08 | 0.289 | -0.164 |
| BXD09 | -0.822 | -0.579 |
| CAST | -2.753 | 0.035 |
| CCcont | -0.153 | -0.12 |
| DS01 | -0.055 | 0.496 |
| DS02 | -1.705 | 0.21 |
| DS04 | -3.462 | -0.124 |
| DS0c | -0.236 | 0.299 |
| GP01 | 1.029 | 1.296 |
| GP02 | 1.184 | 0.441 |
| GP0c | 0.437 | 0.443 |
| NOD | -1.787 | 0.052 |
| NZO | -1.74 | -0.078 |
| PWK | -0.382 | 0.624 |
| H37Rv_KO_CtpC | -1.273 | 0.479 |
| H37Rv_KO_CtpD | 2.08 | -0.123 |
| H37Rv_KO_Rv1272 | -1.175 | 0.63 |
| H37Rv_KO_SugABC | -0.99 | 1.068 |
| H37Rv_KO_MbtN | -0.553 | -0.1 |
| Trans05 | -1.971 | -0.243 |
| macrophage_unactivated | 1.237 | 0.739 |
| IL1 | -0.543 | 0.694 |
| Rapamycin | 0.12 | -0.43 |
| Tcell | 0.971 | 0.688 |
| GMCSF | -0.858 | 0.034 |
| IFNab | -0.29 | -0.514 |
| IFNg | -2.053 | 0.107 |
| IFNg_GMCSF1 | -0.258 | 0.804 |
| Rv1432_day32 | 1.824 | 0.755 |
| Rv1565c_day32 | -1.622 | 0.403 |
| secA2_input | -1.237 | -0.279 |
| delta_Rv3594 | -2.093 | 0.171 |
| delta_Rv3717 | -0.088 | -0.067 |
| delta_Rv3811 | -1.074 | -0.098 |
| delta_Rv0954 | -0.756 | 0.207 |
| PonA1 | 0.638 | 0.224 |
| EccD1_KO | 0.21 | 0.756 |
| EspI_KO | 1.874 | 1.309 |
| PE35_KO | -0.359 | 0.939 |
| PPE68_KO | 0.515 | 1.238 |
| glycerol2 | 0.307 | 0.425 |
| lignocerate | -0.279 | -0.032 |
| oleate | 1.354 | 0.543 |
| phosphatidylcholine | 0.276 | 0.245 |
| acetate | -0.569 | -0.346 |
| glucAc | -1.138 | -0.136 |
| Rv0950ko | -0.681 | 0.389 |
| Rv1096ko | -0.977 | -0.16 |
| Rv3684ko | -1.212 | 0.0 |
| delta_otsA_trehalose | -0.507 | -0.451 |