Top 10 genes with highest correlation to Rv0257/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0256c/PPE2 | (cc=0.5229) | info on Rv0256c/PPE2 |
| Rv1492/mutA | (cc=0.5082) | info on Rv1492/mutA |
| Rv1314c/- | (cc=0.4514) | info on Rv1314c/- |
| Rv2820c/- | (cc=0.4502) | info on Rv2820c/- |
| Rv2977c/thiL | (cc=0.437) | info on Rv2977c/thiL |
| Rv1319c/- | (cc=0.421) | info on Rv1319c/- |
| Rv1493/mutB | (cc=0.4088) | info on Rv1493/mutB |
| Rv1065/- | (cc=0.4055) | info on Rv1065/- |
| Rv3290c/lat | (cc=0.3886) | info on Rv3290c/lat |
| Rv0959/- | (cc=0.3884) | info on Rv0959/- |
Correlation of Rv0257/- with Rv1492/mutA
Normalized LFCs for Rv0257/-:
(description and provenance of datasets)
| Rv0257/- | Rv1492/mutA | |
| Fe_supp_jason_reseq | -0.2 | 0.747 |
| low_pH_jason_reseq | 0.174 | -0.49 |
| NO_jason_reseq | 0.105 | -0.323 |
| B6_jason_reseq | -1.556 | -2.544 |
| MHCII_jason_reseq | -0.692 | -0.184 |
| Isoniazid02 | 0.096 | 0.521 |
| Rifampicin4 | 0.382 | 0.969 |
| Ethambutol3 | 3.694 | 0.488 |
| Meropenem3 | 0.695 | 0.375 |
| Vancomycin16 | 0.072 | 0.658 |
| Rv2680_day32 | -0.475 | -0.151 |
| H37Rv_KO_MarP | -0.684 | -0.343 |
| hypoxia_3wks | 0.634 | -0.335 |
| hypoxia_6wks | -0.906 | -1.242 |
| glycerol | -0.366 | 0.595 |
| cholesterol | -0.313 | 0.236 |
| AJ | -0.237 | -1.074 |
| Bibs02 | 0.536 | -0.305 |
| Bibs02c | -0.558 | -0.349 |
| BL6 | -1.268 | -0.714 |
| BL6a | -0.228 | -1.456 |
| BXD01 | -0.015 | 0.384 |
| BXD010 | -1.134 | 0.209 |
| BXD011 | -0.511 | -0.526 |
| BXD03 | 0.653 | -0.225 |
| BXD04 | -0.723 | -0.83 |
| BXD05 | -1.515 | -0.646 |
| BXD06 | -0.768 | -0.923 |
| BXD07 | -1.245 | -0.483 |
| BXD08 | 0.289 | 0.228 |
| BXD09 | -0.822 | -0.943 |
| CAST | -2.753 | -2.142 |
| CCcont | -0.153 | 0.649 |
| DS01 | -0.055 | -0.616 |
| DS02 | -1.705 | -1.909 |
| DS04 | -3.462 | -2.337 |
| DS0c | -0.236 | -0.896 |
| GP01 | 1.029 | 0.4 |
| GP02 | 1.184 | 1.078 |
| GP0c | 0.437 | 0.537 |
| NOD | -1.787 | -1.002 |
| NZO | -1.74 | -0.79 |
| PWK | -0.382 | -1.932 |
| H37Rv_KO_CtpC | -1.273 | -0.494 |
| H37Rv_KO_CtpD | 2.08 | -0.211 |
| H37Rv_KO_Rv1272 | -1.175 | 0.381 |
| H37Rv_KO_SugABC | -0.99 | -0.331 |
| H37Rv_KO_MbtN | -0.553 | -1.528 |
| Trans05 | -1.971 | -0.65 |
| macrophage_unactivated | 1.237 | 0.066 |
| IL1 | -0.543 | 0.365 |
| Rapamycin | 0.12 | 0.347 |
| Tcell | 0.971 | 0.619 |
| GMCSF | -0.858 | -0.143 |
| IFNab | -0.29 | -0.2 |
| IFNg | -2.053 | -0.059 |
| IFNg_GMCSF1 | -0.258 | -0.17 |
| Rv1432_day32 | 1.824 | -1.005 |
| Rv1565c_day32 | -1.622 | -1.144 |
| secA2_input | -1.237 | 0.845 |
| delta_Rv3594 | -2.093 | 0.132 |
| delta_Rv3717 | -0.088 | -0.257 |
| delta_Rv3811 | -1.074 | 0.265 |
| delta_Rv0954 | -0.756 | 0.342 |
| PonA1 | 0.638 | 0.575 |
| EccD1_KO | 0.21 | 1.098 |
| EspI_KO | 1.874 | 0.87 |
| PE35_KO | -0.359 | 0.773 |
| PPE68_KO | 0.515 | 0.582 |
| glycerol2 | 0.307 | -0.227 |
| lignocerate | -0.279 | 0.329 |
| oleate | 1.354 | 0.488 |
| phosphatidylcholine | 0.276 | 0.634 |
| acetate | -0.569 | -0.213 |
| glucAc | -1.138 | 0.092 |
| Rv0950ko | -0.681 | -0.187 |
| Rv1096ko | -0.977 | -0.483 |
| Rv3684ko | -1.212 | -0.599 |
| delta_otsA_trehalose | -0.507 | -0.708 |