Top 10 genes with highest correlation to Rv0254c/cobU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3849/espR | (cc=0.5483) | info on Rv3849/espR |
| Rv3194c/- | (cc=0.5189) | info on Rv3194c/- |
| Rv3072c/- | (cc=0.4951) | info on Rv3072c/- |
| Rv3323c/moaX | (cc=0.4891) | info on Rv3323c/moaX |
| Rv0342/iniA | (cc=0.489) | info on Rv0342/iniA |
| Rv2758c/vapB21 | (cc=0.4871) | info on Rv2758c/vapB21 |
| Rv3559c/- | (cc=0.4823) | info on Rv3559c/- |
| Rv1987/- | (cc=0.4773) | info on Rv1987/- |
| Rv0432/sodC | (cc=0.4752) | info on Rv0432/sodC |
| Rv2589/gabT | (cc=0.4721) | info on Rv2589/gabT |
Correlation of Rv0254c/cobU with Rv0342/iniA
Normalized LFCs for Rv0254c/cobU:
(description and provenance of datasets)
| Rv0254c/cobU | Rv0342/iniA | |
| Fe_supp_jason_reseq | 0.731 | -0.583 |
| low_pH_jason_reseq | -0.37 | -0.781 |
| NO_jason_reseq | -0.995 | 0.795 |
| B6_jason_reseq | -0.688 | 0.252 |
| MHCII_jason_reseq | -0.842 | 0.5 |
| Isoniazid02 | -2.808 | -2.219 |
| Rifampicin4 | 0.636 | 0.33 |
| Ethambutol3 | -2.219 | -2.382 |
| Meropenem3 | -0.526 | -1.242 |
| Vancomycin16 | -0.515 | -0.7 |
| Rv2680_day32 | 0.338 | -0.18 |
| H37Rv_KO_MarP | -0.145 | 0.368 |
| hypoxia_3wks | -0.475 | -0.112 |
| hypoxia_6wks | 0.411 | -0.535 |
| glycerol | 0.807 | 0.532 |
| cholesterol | 0.558 | 0.446 |
| AJ | 0.434 | 0.765 |
| Bibs02 | -0.136 | 0.009 |
| Bibs02c | -1.234 | -0.656 |
| BL6 | 0.446 | -0.238 |
| BL6a | -0.809 | -0.331 |
| BXD01 | -1.084 | -0.119 |
| BXD010 | -0.767 | -0.076 |
| BXD011 | -0.501 | 0.106 |
| BXD03 | -0.085 | 0.207 |
| BXD04 | -0.415 | 0.058 |
| BXD05 | -0.413 | 0.414 |
| BXD06 | -0.322 | 0.387 |
| BXD07 | -0.652 | -0.097 |
| BXD08 | 0.38 | 0.05 |
| BXD09 | -0.268 | -0.062 |
| CAST | -1.298 | 0.322 |
| CCcont | 0.36 | -0.276 |
| DS01 | -0.861 | -0.477 |
| DS02 | -1.363 | 0.221 |
| DS04 | -1.727 | -0.646 |
| DS0c | 0.077 | 0.489 |
| GP01 | 0.995 | 0.527 |
| GP02 | -0.995 | 0.28 |
| GP0c | -0.178 | 0.068 |
| NOD | -0.13 | 0.042 |
| NZO | 0.399 | 0.549 |
| PWK | -0.257 | 0.517 |
| H37Rv_KO_CtpC | -0.651 | 0.207 |
| H37Rv_KO_CtpD | 1.216 | -0.05 |
| H37Rv_KO_Rv1272 | 0.117 | 0.588 |
| H37Rv_KO_SugABC | 0.663 | 0.512 |
| H37Rv_KO_MbtN | -0.228 | 0.24 |
| Trans05 | -0.636 | 0.793 |
| macrophage_unactivated | 0.183 | -0.429 |
| IL1 | 0.234 | -0.35 |
| Rapamycin | 0.97 | 0.147 |
| Tcell | 0.391 | -0.081 |
| GMCSF | 1.249 | -0.312 |
| IFNab | 0.901 | 0.239 |
| IFNg | 0.665 | -0.155 |
| IFNg_GMCSF1 | 0.974 | 0.176 |
| Rv1432_day32 | -0.334 | 0.186 |
| Rv1565c_day32 | 0.278 | 0.39 |
| secA2_input | 0.726 | 0.564 |
| delta_Rv3594 | -0.063 | -0.509 |
| delta_Rv3717 | 0.35 | -0.352 |
| delta_Rv3811 | 0.205 | -0.495 |
| delta_Rv0954 | 0.451 | -0.351 |
| PonA1 | 0.684 | -0.163 |
| EccD1_KO | -0.635 | 0.023 |
| EspI_KO | -1.577 | -0.522 |
| PE35_KO | -0.68 | -0.292 |
| PPE68_KO | -0.637 | -0.659 |
| glycerol2 | 1.188 | 0.423 |
| lignocerate | 1.579 | 0.66 |
| oleate | -0.079 | 0.461 |
| phosphatidylcholine | 0.962 | 0.391 |
| acetate | 2.071 | 0.632 |
| glucAc | 1.662 | 0.381 |
| Rv0950ko | 0.88 | 0.286 |
| Rv1096ko | 0.715 | 0.531 |
| Rv3684ko | 0.327 | 0.311 |
| delta_otsA_trehalose | 0.065 | 1.165 |