Top 10 genes with highest correlation to Rv0254c/cobU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3849/espR | (cc=0.5483) | info on Rv3849/espR |
| Rv3194c/- | (cc=0.5189) | info on Rv3194c/- |
| Rv3072c/- | (cc=0.4951) | info on Rv3072c/- |
| Rv3323c/moaX | (cc=0.4891) | info on Rv3323c/moaX |
| Rv0342/iniA | (cc=0.489) | info on Rv0342/iniA |
| Rv2758c/vapB21 | (cc=0.4871) | info on Rv2758c/vapB21 |
| Rv3559c/- | (cc=0.4823) | info on Rv3559c/- |
| Rv1987/- | (cc=0.4773) | info on Rv1987/- |
| Rv0432/sodC | (cc=0.4752) | info on Rv0432/sodC |
| Rv2589/gabT | (cc=0.4721) | info on Rv2589/gabT |
Correlation of Rv0254c/cobU with Rv3849/espR
Normalized LFCs for Rv0254c/cobU:
(description and provenance of datasets)
| Rv0254c/cobU | Rv3849/espR | |
| Fe_supp_jason_reseq | 0.731 | 2.564 |
| low_pH_jason_reseq | -0.37 | 1.571 |
| NO_jason_reseq | -0.995 | -0.69 |
| B6_jason_reseq | -0.688 | -0.292 |
| MHCII_jason_reseq | -0.842 | -0.257 |
| Isoniazid02 | -2.808 | -3.453 |
| Rifampicin4 | 0.636 | 0.452 |
| Ethambutol3 | -2.219 | -2.122 |
| Meropenem3 | -0.526 | -1.899 |
| Vancomycin16 | -0.515 | 0.133 |
| Rv2680_day32 | 0.338 | -0.131 |
| H37Rv_KO_MarP | -0.145 | -0.157 |
| hypoxia_3wks | -0.475 | -1.511 |
| hypoxia_6wks | 0.411 | -0.791 |
| glycerol | 0.807 | 0.249 |
| cholesterol | 0.558 | 0.882 |
| AJ | 0.434 | -2.123 |
| Bibs02 | -0.136 | -1.491 |
| Bibs02c | -1.234 | -1.914 |
| BL6 | 0.446 | -1.02 |
| BL6a | -0.809 | -1.812 |
| BXD01 | -1.084 | -1.192 |
| BXD010 | -0.767 | -1.172 |
| BXD011 | -0.501 | -0.817 |
| BXD03 | -0.085 | -0.98 |
| BXD04 | -0.415 | -1.131 |
| BXD05 | -0.413 | -1.098 |
| BXD06 | -0.322 | -1.221 |
| BXD07 | -0.652 | -1.267 |
| BXD08 | 0.38 | -1.217 |
| BXD09 | -0.268 | -1.286 |
| CAST | -1.298 | -1.879 |
| CCcont | 0.36 | 1.236 |
| DS01 | -0.861 | -2.161 |
| DS02 | -1.363 | -1.99 |
| DS04 | -1.727 | -1.775 |
| DS0c | 0.077 | 0.093 |
| GP01 | 0.995 | -0.903 |
| GP02 | -0.995 | -0.761 |
| GP0c | -0.178 | -0.834 |
| NOD | -0.13 | -0.548 |
| NZO | 0.399 | -1.627 |
| PWK | -0.257 | -1.795 |
| H37Rv_KO_CtpC | -0.651 | -1.177 |
| H37Rv_KO_CtpD | 1.216 | -0.381 |
| H37Rv_KO_Rv1272 | 0.117 | -1.15 |
| H37Rv_KO_SugABC | 0.663 | -0.906 |
| H37Rv_KO_MbtN | -0.228 | -0.371 |
| Trans05 | -0.636 | -0.947 |
| macrophage_unactivated | 0.183 | 0.436 |
| IL1 | 0.234 | 0.0 |
| Rapamycin | 0.97 | 0.0 |
| Tcell | 0.391 | 0.0 |
| GMCSF | 1.249 | 0.0 |
| IFNab | 0.901 | 0.0 |
| IFNg | 0.665 | 0.0 |
| IFNg_GMCSF1 | 0.974 | 0.0 |
| Rv1432_day32 | -0.334 | -0.18 |
| Rv1565c_day32 | 0.278 | 0.0 |
| secA2_input | 0.726 | 1.024 |
| delta_Rv3594 | -0.063 | -3.244 |
| delta_Rv3717 | 0.35 | -2.624 |
| delta_Rv3811 | 0.205 | -3.771 |
| delta_Rv0954 | 0.451 | -1.38 |
| PonA1 | 0.684 | 3.114 |
| EccD1_KO | -0.635 | -3.256 |
| EspI_KO | -1.577 | -3.069 |
| PE35_KO | -0.68 | 1.756 |
| PPE68_KO | -0.637 | 1.049 |
| glycerol2 | 1.188 | 0.0 |
| lignocerate | 1.579 | 0.0 |
| oleate | -0.079 | 0.0 |
| phosphatidylcholine | 0.962 | 1.769 |
| acetate | 2.071 | 2.1 |
| glucAc | 1.662 | 1.868 |
| Rv0950ko | 0.88 | 0.253 |
| Rv1096ko | 0.715 | -0.106 |
| Rv3684ko | 0.327 | 0.639 |
| delta_otsA_trehalose | 0.065 | 1.157 |