Top 10 genes with highest correlation to Rv0247c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0248c/- | (cc=0.7475) | info on Rv0248c/- |
| Rv0249c/- | (cc=0.7398) | info on Rv0249c/- |
| Rv0296c/- | (cc=0.5762) | info on Rv0296c/- |
| Rv0634A/- | (cc=0.5588) | info on Rv0634A/- |
| Rv1535/- | (cc=0.5585) | info on Rv1535/- |
| Rv3057c/- | (cc=0.5539) | info on Rv3057c/- |
| Rv3160c/- | (cc=0.5496) | info on Rv3160c/- |
| Rv2989/- | (cc=0.5305) | info on Rv2989/- |
| Rv0157/pntB | (cc=0.5264) | info on Rv0157/pntB |
| Rv1193/fadD36 | (cc=0.5245) | info on Rv1193/fadD36 |
Correlation of Rv0247c/- with Rv3057c/-
Normalized LFCs for Rv0247c/-:
(description and provenance of datasets)
| Rv0247c/- | Rv3057c/- | |
| Fe_supp_jason_reseq | 1.983 | -0.59 |
| low_pH_jason_reseq | -1.419 | -0.609 |
| NO_jason_reseq | -1.231 | -0.84 |
| B6_jason_reseq | -0.941 | -2.072 |
| MHCII_jason_reseq | -0.572 | -1.985 |
| Isoniazid02 | 1.883 | -0.333 |
| Rifampicin4 | 0.69 | -0.084 |
| Ethambutol3 | 0.804 | -0.285 |
| Meropenem3 | 2.189 | 0.713 |
| Vancomycin16 | 0.353 | 1.724 |
| Rv2680_day32 | -2.632 | -2.261 |
| H37Rv_KO_MarP | 0.0 | 0.047 |
| hypoxia_3wks | -1.36 | -0.542 |
| hypoxia_6wks | -1.934 | -0.716 |
| glycerol | -2.017 | -1.164 |
| cholesterol | 0.057 | -0.547 |
| AJ | -2.318 | -2.245 |
| Bibs02 | -1.827 | -1.888 |
| Bibs02c | -2.09 | -2.123 |
| BL6 | -1.125 | -1.134 |
| BL6a | -1.435 | -2.414 |
| BXD01 | -1.052 | -2.872 |
| BXD010 | 0.674 | -1.1 |
| BXD011 | -0.824 | -2.12 |
| BXD03 | 0.42 | -1.068 |
| BXD04 | -0.549 | -2.004 |
| BXD05 | -1.21 | -1.993 |
| BXD06 | -0.768 | -2.135 |
| BXD07 | -0.702 | -1.915 |
| BXD08 | -0.674 | -2.02 |
| BXD09 | -1.135 | -2.19 |
| CAST | -1.023 | -1.775 |
| CCcont | 2.237 | -0.965 |
| DS01 | -1.359 | -3.037 |
| DS02 | -0.714 | -2.511 |
| DS04 | -0.533 | -2.965 |
| DS0c | -1.403 | -2.362 |
| GP01 | -0.986 | -1.134 |
| GP02 | -0.831 | -1.13 |
| GP0c | -1.299 | -1.131 |
| NOD | 1.534 | -1.03 |
| NZO | 0.228 | -2.25 |
| PWK | -1.584 | -1.071 |
| H37Rv_KO_CtpC | 1.332 | 0.224 |
| H37Rv_KO_CtpD | -0.283 | -0.668 |
| H37Rv_KO_Rv1272 | -0.387 | -1.491 |
| H37Rv_KO_SugABC | -0.083 | -2.062 |
| H37Rv_KO_MbtN | -0.396 | -1.317 |
| Trans05 | -1.175 | -2.483 |
| macrophage_unactivated | 0.896 | -0.571 |
| IL1 | -1.05 | 0.228 |
| Rapamycin | -0.62 | 0.285 |
| Tcell | 0.753 | 0.476 |
| GMCSF | -1.151 | 0.372 |
| IFNab | -1.07 | 0.218 |
| IFNg | -1.165 | 0.417 |
| IFNg_GMCSF1 | -0.412 | 0.459 |
| Rv1432_day32 | -3.206 | -3.233 |
| Rv1565c_day32 | -0.415 | 0.049 |
| secA2_input | 0.282 | -0.014 |
| delta_Rv3594 | -0.788 | -2.074 |
| delta_Rv3717 | -1.664 | -3.053 |
| delta_Rv3811 | -0.391 | -1.991 |
| delta_Rv0954 | 1.441 | 0.77 |
| PonA1 | 1.182 | 0.555 |
| EccD1_KO | 0.697 | 0.888 |
| EspI_KO | 2.23 | 0.844 |
| PE35_KO | 1.683 | 0.149 |
| PPE68_KO | 1.789 | 0.506 |
| glycerol2 | 1.941 | 0.914 |
| lignocerate | -0.32 | -0.96 |
| oleate | 1.418 | -1.733 |
| phosphatidylcholine | -0.508 | -0.978 |
| acetate | -0.78 | 0.382 |
| glucAc | 0.3 | 0.303 |
| Rv0950ko | 0.314 | -0.292 |
| Rv1096ko | 0.063 | 0.558 |
| Rv3684ko | -0.072 | -0.626 |
| delta_otsA_trehalose | -1.786 | -0.35 |