Top 10 genes with highest correlation to Rv0247c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0248c/- | (cc=0.7475) | info on Rv0248c/- |
| Rv0249c/- | (cc=0.7398) | info on Rv0249c/- |
| Rv0296c/- | (cc=0.5762) | info on Rv0296c/- |
| Rv0634A/- | (cc=0.5588) | info on Rv0634A/- |
| Rv1535/- | (cc=0.5585) | info on Rv1535/- |
| Rv3057c/- | (cc=0.5539) | info on Rv3057c/- |
| Rv3160c/- | (cc=0.5496) | info on Rv3160c/- |
| Rv2989/- | (cc=0.5305) | info on Rv2989/- |
| Rv0157/pntB | (cc=0.5264) | info on Rv0157/pntB |
| Rv1193/fadD36 | (cc=0.5245) | info on Rv1193/fadD36 |
Correlation of Rv0247c/- with Rv0249c/-
Normalized LFCs for Rv0247c/-:
(description and provenance of datasets)
| Rv0247c/- | Rv0249c/- | |
| Fe_supp_jason_reseq | 1.983 | 1.841 |
| low_pH_jason_reseq | -1.419 | -1.255 |
| NO_jason_reseq | -1.231 | -3.961 |
| B6_jason_reseq | -0.941 | -1.674 |
| MHCII_jason_reseq | -0.572 | -1.37 |
| Isoniazid02 | 1.883 | 2.206 |
| Rifampicin4 | 0.69 | -0.384 |
| Ethambutol3 | 0.804 | 0.435 |
| Meropenem3 | 2.189 | 1.688 |
| Vancomycin16 | 0.353 | 0.0 |
| Rv2680_day32 | -2.632 | -3.066 |
| H37Rv_KO_MarP | 0.0 | 0.714 |
| hypoxia_3wks | -1.36 | -2.157 |
| hypoxia_6wks | -1.934 | -2.714 |
| glycerol | -2.017 | -2.681 |
| cholesterol | 0.057 | -0.26 |
| AJ | -2.318 | -2.795 |
| Bibs02 | -1.827 | -2.203 |
| Bibs02c | -2.09 | -2.402 |
| BL6 | -1.125 | -1.932 |
| BL6a | -1.435 | -2.907 |
| BXD01 | -1.052 | -1.496 |
| BXD010 | 0.674 | -1.701 |
| BXD011 | -0.824 | -1.691 |
| BXD03 | 0.42 | -0.907 |
| BXD04 | -0.549 | 0.209 |
| BXD05 | -1.21 | -2.079 |
| BXD06 | -0.768 | -1.461 |
| BXD07 | -0.702 | -1.932 |
| BXD08 | -0.674 | -2.054 |
| BXD09 | -1.135 | -2.062 |
| CAST | -1.023 | -1.984 |
| CCcont | 2.237 | 1.082 |
| DS01 | -1.359 | 0.286 |
| DS02 | -0.714 | 0.402 |
| DS04 | -0.533 | 0.0 |
| DS0c | -1.403 | 0.434 |
| GP01 | -0.986 | -1.796 |
| GP02 | -0.831 | -1.513 |
| GP0c | -1.299 | -2.235 |
| NOD | 1.534 | -1.507 |
| NZO | 0.228 | -2.783 |
| PWK | -1.584 | -1.773 |
| H37Rv_KO_CtpC | 1.332 | 0.142 |
| H37Rv_KO_CtpD | -0.283 | -1.091 |
| H37Rv_KO_Rv1272 | -0.387 | -1.968 |
| H37Rv_KO_SugABC | -0.083 | -0.939 |
| H37Rv_KO_MbtN | -0.396 | -0.977 |
| Trans05 | -1.175 | -2.128 |
| macrophage_unactivated | 0.896 | 1.054 |
| IL1 | -1.05 | -0.819 |
| Rapamycin | -0.62 | -0.196 |
| Tcell | 0.753 | 2.483 |
| GMCSF | -1.151 | -0.935 |
| IFNab | -1.07 | -1.318 |
| IFNg | -1.165 | -1.914 |
| IFNg_GMCSF1 | -0.412 | -1.647 |
| Rv1432_day32 | -3.206 | -2.85 |
| Rv1565c_day32 | -0.415 | -1.229 |
| secA2_input | 0.282 | -0.546 |
| delta_Rv3594 | -0.788 | -0.428 |
| delta_Rv3717 | -1.664 | -1.891 |
| delta_Rv3811 | -0.391 | -0.576 |
| delta_Rv0954 | 1.441 | 1.292 |
| PonA1 | 1.182 | 1.846 |
| EccD1_KO | 0.697 | 0.395 |
| EspI_KO | 2.23 | 0.442 |
| PE35_KO | 1.683 | 0.035 |
| PPE68_KO | 1.789 | 0.422 |
| glycerol2 | 1.941 | 4.467 |
| lignocerate | -0.32 | 0.431 |
| oleate | 1.418 | 5.156 |
| phosphatidylcholine | -0.508 | 1.162 |
| acetate | -0.78 | -0.78 |
| glucAc | 0.3 | 0.366 |
| Rv0950ko | 0.314 | 0.308 |
| Rv1096ko | 0.063 | -0.881 |
| Rv3684ko | -0.072 | -0.701 |
| delta_otsA_trehalose | -1.786 | -2.062 |