Top 10 genes with highest correlation to Rv0247c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0248c/- | (cc=0.7475) | info on Rv0248c/- |
| Rv0249c/- | (cc=0.7398) | info on Rv0249c/- |
| Rv0296c/- | (cc=0.5762) | info on Rv0296c/- |
| Rv0634A/- | (cc=0.5588) | info on Rv0634A/- |
| Rv1535/- | (cc=0.5585) | info on Rv1535/- |
| Rv3057c/- | (cc=0.5539) | info on Rv3057c/- |
| Rv3160c/- | (cc=0.5496) | info on Rv3160c/- |
| Rv2989/- | (cc=0.5305) | info on Rv2989/- |
| Rv0157/pntB | (cc=0.5264) | info on Rv0157/pntB |
| Rv1193/fadD36 | (cc=0.5245) | info on Rv1193/fadD36 |
Correlation of Rv0247c/- with Rv0248c/-
Normalized LFCs for Rv0247c/-:
(description and provenance of datasets)
| Rv0247c/- | Rv0248c/- | |
| Fe_supp_jason_reseq | 1.983 | 2.208 |
| low_pH_jason_reseq | -1.419 | -0.355 |
| NO_jason_reseq | -1.231 | -2.294 |
| B6_jason_reseq | -0.941 | -0.97 |
| MHCII_jason_reseq | -0.572 | -0.977 |
| Isoniazid02 | 1.883 | 1.007 |
| Rifampicin4 | 0.69 | -0.653 |
| Ethambutol3 | 0.804 | -0.403 |
| Meropenem3 | 2.189 | 3.554 |
| Vancomycin16 | 0.353 | -1.409 |
| Rv2680_day32 | -2.632 | -2.482 |
| H37Rv_KO_MarP | 0.0 | 0.447 |
| hypoxia_3wks | -1.36 | -1.806 |
| hypoxia_6wks | -1.934 | -2.591 |
| glycerol | -2.017 | -1.745 |
| cholesterol | 0.057 | -0.354 |
| AJ | -2.318 | -2.247 |
| Bibs02 | -1.827 | -2.099 |
| Bibs02c | -2.09 | -2.026 |
| BL6 | -1.125 | -1.812 |
| BL6a | -1.435 | -1.918 |
| BXD01 | -1.052 | -1.678 |
| BXD010 | 0.674 | -1.557 |
| BXD011 | -0.824 | -1.463 |
| BXD03 | 0.42 | -0.664 |
| BXD04 | -0.549 | -0.409 |
| BXD05 | -1.21 | -2.073 |
| BXD06 | -0.768 | -1.533 |
| BXD07 | -0.702 | -1.783 |
| BXD08 | -0.674 | -1.288 |
| BXD09 | -1.135 | -1.919 |
| CAST | -1.023 | -1.668 |
| CCcont | 2.237 | 1.049 |
| DS01 | -1.359 | 0.245 |
| DS02 | -0.714 | 0.0 |
| DS04 | -0.533 | 0.453 |
| DS0c | -1.403 | 0.267 |
| GP01 | -0.986 | -1.619 |
| GP02 | -0.831 | -1.364 |
| GP0c | -1.299 | -2.002 |
| NOD | 1.534 | -0.612 |
| NZO | 0.228 | -2.724 |
| PWK | -1.584 | -1.9 |
| H37Rv_KO_CtpC | 1.332 | 0.488 |
| H37Rv_KO_CtpD | -0.283 | -0.863 |
| H37Rv_KO_Rv1272 | -0.387 | -1.446 |
| H37Rv_KO_SugABC | -0.083 | -1.137 |
| H37Rv_KO_MbtN | -0.396 | -0.841 |
| Trans05 | -1.175 | -2.012 |
| macrophage_unactivated | 0.896 | 1.594 |
| IL1 | -1.05 | -2.572 |
| Rapamycin | -0.62 | -2.661 |
| Tcell | 0.753 | 4.027 |
| GMCSF | -1.151 | -2.289 |
| IFNab | -1.07 | -2.621 |
| IFNg | -1.165 | -2.798 |
| IFNg_GMCSF1 | -0.412 | -2.724 |
| Rv1432_day32 | -3.206 | -3.215 |
| Rv1565c_day32 | -0.415 | -0.873 |
| secA2_input | 0.282 | -0.05 |
| delta_Rv3594 | -0.788 | -0.805 |
| delta_Rv3717 | -1.664 | -2.152 |
| delta_Rv3811 | -0.391 | -1.157 |
| delta_Rv0954 | 1.441 | 1.579 |
| PonA1 | 1.182 | 1.2 |
| EccD1_KO | 0.697 | 0.421 |
| EspI_KO | 2.23 | 1.012 |
| PE35_KO | 1.683 | 0.464 |
| PPE68_KO | 1.789 | 0.787 |
| glycerol2 | 1.941 | 3.602 |
| lignocerate | -0.32 | 0.1 |
| oleate | 1.418 | 3.963 |
| phosphatidylcholine | -0.508 | 0.611 |
| acetate | -0.78 | 0.266 |
| glucAc | 0.3 | 0.242 |
| Rv0950ko | 0.314 | 0.6 |
| Rv1096ko | 0.063 | -0.109 |
| Rv3684ko | -0.072 | 0.059 |
| delta_otsA_trehalose | -1.786 | -0.737 |