Top 10 genes with highest correlation to Rv0247c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0248c/- | (cc=0.7475) | info on Rv0248c/- |
| Rv0249c/- | (cc=0.7398) | info on Rv0249c/- |
| Rv0296c/- | (cc=0.5762) | info on Rv0296c/- |
| Rv0634A/- | (cc=0.5588) | info on Rv0634A/- |
| Rv1535/- | (cc=0.5585) | info on Rv1535/- |
| Rv3057c/- | (cc=0.5539) | info on Rv3057c/- |
| Rv3160c/- | (cc=0.5496) | info on Rv3160c/- |
| Rv2989/- | (cc=0.5305) | info on Rv2989/- |
| Rv0157/pntB | (cc=0.5264) | info on Rv0157/pntB |
| Rv1193/fadD36 | (cc=0.5245) | info on Rv1193/fadD36 |
Correlation of Rv0247c/- with Rv2989/-
Normalized LFCs for Rv0247c/-:
(description and provenance of datasets)
| Rv0247c/- | Rv2989/- | |
| Fe_supp_jason_reseq | 1.983 | 3.044 |
| low_pH_jason_reseq | -1.419 | -1.673 |
| NO_jason_reseq | -1.231 | -3.071 |
| B6_jason_reseq | -0.941 | -1.298 |
| MHCII_jason_reseq | -0.572 | -1.806 |
| Isoniazid02 | 1.883 | -1.534 |
| Rifampicin4 | 0.69 | 0.141 |
| Ethambutol3 | 0.804 | 2.022 |
| Meropenem3 | 2.189 | 0.902 |
| Vancomycin16 | 0.353 | 0.65 |
| Rv2680_day32 | -2.632 | -2.939 |
| H37Rv_KO_MarP | 0.0 | -1.521 |
| hypoxia_3wks | -1.36 | -2.054 |
| hypoxia_6wks | -1.934 | -2.76 |
| glycerol | -2.017 | -3.397 |
| cholesterol | 0.057 | -3.158 |
| AJ | -2.318 | -4.686 |
| Bibs02 | -1.827 | -1.534 |
| Bibs02c | -2.09 | -3.675 |
| BL6 | -1.125 | -3.258 |
| BL6a | -1.435 | -4.84 |
| BXD01 | -1.052 | -3.64 |
| BXD010 | 0.674 | -3.579 |
| BXD011 | -0.824 | -3.56 |
| BXD03 | 0.42 | -3.779 |
| BXD04 | -0.549 | -3.456 |
| BXD05 | -1.21 | -3.761 |
| BXD06 | -0.768 | -3.597 |
| BXD07 | -0.702 | -3.87 |
| BXD08 | -0.674 | -3.717 |
| BXD09 | -1.135 | -3.927 |
| CAST | -1.023 | -3.714 |
| CCcont | 2.237 | -2.131 |
| DS01 | -1.359 | -3.179 |
| DS02 | -0.714 | -3.044 |
| DS04 | -0.533 | -3.733 |
| DS0c | -1.403 | -4.173 |
| GP01 | -0.986 | -2.759 |
| GP02 | -0.831 | -2.325 |
| GP0c | -1.299 | -3.634 |
| NOD | 1.534 | -3.023 |
| NZO | 0.228 | -4.13 |
| PWK | -1.584 | -2.914 |
| H37Rv_KO_CtpC | 1.332 | -0.035 |
| H37Rv_KO_CtpD | -0.283 | 0.587 |
| H37Rv_KO_Rv1272 | -0.387 | -3.941 |
| H37Rv_KO_SugABC | -0.083 | -2.349 |
| H37Rv_KO_MbtN | -0.396 | -1.734 |
| Trans05 | -1.175 | -3.652 |
| macrophage_unactivated | 0.896 | -0.259 |
| IL1 | -1.05 | 1.32 |
| Rapamycin | -0.62 | 0.577 |
| Tcell | 0.753 | 3.812 |
| GMCSF | -1.151 | -0.57 |
| IFNab | -1.07 | -0.381 |
| IFNg | -1.165 | 0.0 |
| IFNg_GMCSF1 | -0.412 | -1.474 |
| Rv1432_day32 | -3.206 | -4.963 |
| Rv1565c_day32 | -0.415 | -0.599 |
| secA2_input | 0.282 | 0.266 |
| delta_Rv3594 | -0.788 | -2.857 |
| delta_Rv3717 | -1.664 | -3.132 |
| delta_Rv3811 | -0.391 | -2.134 |
| delta_Rv0954 | 1.441 | -1.168 |
| PonA1 | 1.182 | 0.023 |
| EccD1_KO | 0.697 | 0.589 |
| EspI_KO | 2.23 | -0.673 |
| PE35_KO | 1.683 | 0.726 |
| PPE68_KO | 1.789 | -0.086 |
| glycerol2 | 1.941 | -1.749 |
| lignocerate | -0.32 | -2.177 |
| oleate | 1.418 | -2.535 |
| phosphatidylcholine | -0.508 | -0.766 |
| acetate | -0.78 | 0.296 |
| glucAc | 0.3 | 0.578 |
| Rv0950ko | 0.314 | 0.425 |
| Rv1096ko | 0.063 | -1.252 |
| Rv3684ko | -0.072 | -1.847 |
| delta_otsA_trehalose | -1.786 | -3.01 |