Top 10 genes with highest correlation to Rv0222/echA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3847/- | (cc=0.5955) | info on Rv3847/- |
| Rv3770B/- | (cc=0.5824) | info on Rv3770B/- |
| Rv2495c/bkdC | (cc=0.5804) | info on Rv2495c/bkdC |
| Rv3840/- | (cc=0.5591) | info on Rv3840/- |
| Rv0822c/- | (cc=0.5506) | info on Rv0822c/- |
| Rv0220/lipC | (cc=0.534) | info on Rv0220/lipC |
| Rv0971c/echA7 | (cc=0.5292) | info on Rv0971c/echA7 |
| Rv1787/PPE25 | (cc=0.5288) | info on Rv1787/PPE25 |
| Rv3146/nuoB | (cc=0.5256) | info on Rv3146/nuoB |
| Rv1551/plsB1 | (cc=0.5196) | info on Rv1551/plsB1 |
Correlation of Rv0222/echA1 with Rv0220/lipC
Normalized LFCs for Rv0222/echA1:
(description and provenance of datasets)
| Rv0222/echA1 | Rv0220/lipC | |
| Fe_supp_jason_reseq | -3.435 | -0.172 |
| low_pH_jason_reseq | -2.431 | -0.564 |
| NO_jason_reseq | 0.465 | -0.551 |
| B6_jason_reseq | -3.258 | -0.6 |
| MHCII_jason_reseq | -1.782 | -0.075 |
| Isoniazid02 | -0.8 | 0.143 |
| Rifampicin4 | -0.582 | -0.596 |
| Ethambutol3 | -0.164 | 0.452 |
| Meropenem3 | -0.258 | 0.041 |
| Vancomycin16 | -0.57 | -0.329 |
| Rv2680_day32 | -0.048 | -0.125 |
| H37Rv_KO_MarP | -0.138 | 0.301 |
| hypoxia_3wks | 0.63 | 0.195 |
| hypoxia_6wks | -0.065 | -0.106 |
| glycerol | -0.035 | 0.65 |
| cholesterol | 0.861 | 0.142 |
| AJ | 0.442 | 0.155 |
| Bibs02 | -0.237 | 1.02 |
| Bibs02c | -0.887 | -0.815 |
| BL6 | 1.376 | 0.304 |
| BL6a | 0.672 | -0.069 |
| BXD01 | -0.046 | 0.022 |
| BXD010 | -0.191 | 0.506 |
| BXD011 | 1.09 | 0.472 |
| BXD03 | 1.092 | 1.002 |
| BXD04 | 2.172 | 0.896 |
| BXD05 | 1.202 | 1.107 |
| BXD06 | 0.293 | 0.131 |
| BXD07 | 0.891 | 0.579 |
| BXD08 | 1.148 | 0.445 |
| BXD09 | 0.863 | 0.435 |
| CAST | 0.662 | 0.592 |
| CCcont | 0.75 | -0.279 |
| DS01 | -0.306 | 0.51 |
| DS02 | 0.625 | 0.247 |
| DS04 | 2.54 | 0.419 |
| DS0c | 0.317 | 0.179 |
| GP01 | 1.765 | 1.623 |
| GP02 | 1.928 | 1.416 |
| GP0c | 1.358 | 0.602 |
| NOD | 1.741 | 0.454 |
| NZO | -0.035 | -0.254 |
| PWK | -0.78 | 0.311 |
| H37Rv_KO_CtpC | 0.028 | -0.086 |
| H37Rv_KO_CtpD | 1.355 | 0.939 |
| H37Rv_KO_Rv1272 | -0.025 | 0.683 |
| H37Rv_KO_SugABC | 0.682 | 0.814 |
| H37Rv_KO_MbtN | 2.338 | -0.376 |
| Trans05 | -1.09 | -0.576 |
| macrophage_unactivated | -0.035 | 0.922 |
| IL1 | 1.207 | 0.142 |
| Rapamycin | 0.767 | -0.203 |
| Tcell | 0.342 | -0.052 |
| GMCSF | 0.539 | 0.842 |
| IFNab | -0.133 | 0.638 |
| IFNg | 0.059 | 0.331 |
| IFNg_GMCSF1 | 0.101 | 0.663 |
| Rv1432_day32 | 0.18 | 0.0 |
| Rv1565c_day32 | 0.025 | -0.823 |
| secA2_input | -0.794 | -0.817 |
| delta_Rv3594 | -0.187 | -0.242 |
| delta_Rv3717 | -0.607 | -0.307 |
| delta_Rv3811 | -0.379 | -0.299 |
| delta_Rv0954 | -0.242 | 0.227 |
| PonA1 | -0.435 | 0.084 |
| EccD1_KO | -1.727 | -0.628 |
| EspI_KO | -0.268 | -0.642 |
| PE35_KO | 0.175 | -0.362 |
| PPE68_KO | -0.909 | -0.889 |
| glycerol2 | -0.888 | 0.021 |
| lignocerate | -0.919 | -0.357 |
| oleate | -0.207 | 0.142 |
| phosphatidylcholine | -0.689 | -0.172 |
| acetate | -0.447 | -0.427 |
| glucAc | -1.339 | -0.523 |
| Rv0950ko | 0.751 | -0.314 |
| Rv1096ko | 1.3 | 0.235 |
| Rv3684ko | 0.0 | -0.94 |
| delta_otsA_trehalose | -0.267 | 0.317 |