Top 10 genes with highest correlation to Rv0197/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0975c/fadE13 | (cc=0.5592) | info on Rv0975c/fadE13 |
| Rv0456B/mazE1 | (cc=0.5537) | info on Rv0456B/mazE1 |
| Rv1501/- | (cc=0.5435) | info on Rv1501/- |
| Rv0160c/PE4 | (cc=0.5377) | info on Rv0160c/PE4 |
| Rv0148/- | (cc=0.5319) | info on Rv0148/- |
| Rv0145/- | (cc=0.5266) | info on Rv0145/- |
| Rv2004c/- | (cc=0.5216) | info on Rv2004c/- |
| Rv3045/adhC | (cc=0.5198) | info on Rv3045/adhC |
| Rv0073/- | (cc=0.5135) | info on Rv0073/- |
| Rv3023c/- | (cc=0.5012) | info on Rv3023c/- |
Correlation of Rv0197/- with Rv0145/-
Normalized LFCs for Rv0197/-:
(description and provenance of datasets)
| Rv0197/- | Rv0145/- | |
| Fe_supp_jason_reseq | -0.316 | -1.405 |
| low_pH_jason_reseq | 1.066 | -0.268 |
| NO_jason_reseq | 0.171 | 0.016 |
| B6_jason_reseq | -0.383 | -0.405 |
| MHCII_jason_reseq | -0.211 | -0.553 |
| Isoniazid02 | -1.563 | -0.777 |
| Rifampicin4 | 0.241 | 0.0 |
| Ethambutol3 | -0.905 | -0.986 |
| Meropenem3 | -1.37 | -1.487 |
| Vancomycin16 | -0.87 | -1.26 |
| Rv2680_day32 | -0.026 | -0.324 |
| H37Rv_KO_MarP | 0.301 | 0.267 |
| hypoxia_3wks | 0.092 | -0.706 |
| hypoxia_6wks | -0.361 | -1.685 |
| glycerol | 0.325 | 0.214 |
| cholesterol | 0.215 | -0.691 |
| AJ | 0.225 | -0.491 |
| Bibs02 | 0.51 | -0.046 |
| Bibs02c | 0.559 | 0.076 |
| BL6 | 0.247 | -0.481 |
| BL6a | 0.439 | -0.05 |
| BXD01 | -0.077 | 0.257 |
| BXD010 | 0.055 | 0.114 |
| BXD011 | 0.477 | 0.091 |
| BXD03 | 0.076 | 0.581 |
| BXD04 | 0.702 | -0.369 |
| BXD05 | 0.112 | 0.345 |
| BXD06 | -0.059 | 0.016 |
| BXD07 | -0.041 | 0.433 |
| BXD08 | 0.538 | 0.08 |
| BXD09 | -0.042 | -0.117 |
| CAST | 0.537 | 0.042 |
| CCcont | 0.184 | 0.174 |
| DS01 | 0.885 | 0.0 |
| DS02 | 0.268 | -0.759 |
| DS04 | 1.304 | -0.711 |
| DS0c | 0.699 | 0.556 |
| GP01 | 0.147 | 0.517 |
| GP02 | 0.507 | 0.378 |
| GP0c | 0.951 | 0.893 |
| NOD | 0.306 | -0.823 |
| NZO | 0.272 | -0.714 |
| PWK | 0.0 | -0.024 |
| H37Rv_KO_CtpC | 0.688 | -0.147 |
| H37Rv_KO_CtpD | 1.121 | 0.79 |
| H37Rv_KO_Rv1272 | 0.837 | -0.457 |
| H37Rv_KO_SugABC | 0.42 | 0.777 |
| H37Rv_KO_MbtN | 1.073 | 0.505 |
| Trans05 | 0.732 | -0.587 |
| macrophage_unactivated | 1.512 | 0.256 |
| IL1 | -0.552 | -0.463 |
| Rapamycin | 0.261 | -0.706 |
| Tcell | 0.342 | 0.293 |
| GMCSF | 0.734 | -0.412 |
| IFNab | 0.317 | 0.082 |
| IFNg | 0.492 | 0.024 |
| IFNg_GMCSF1 | -0.138 | -0.396 |
| Rv1432_day32 | 0.269 | -1.562 |
| Rv1565c_day32 | 0.905 | 0.813 |
| secA2_input | -0.205 | -0.445 |
| delta_Rv3594 | -0.615 | -0.655 |
| delta_Rv3717 | -0.19 | -0.369 |
| delta_Rv3811 | -0.14 | -0.858 |
| delta_Rv0954 | -0.195 | -0.019 |
| PonA1 | -0.331 | 0.139 |
| EccD1_KO | 0.194 | -0.654 |
| EspI_KO | 0.202 | -0.873 |
| PE35_KO | -0.07 | -1.129 |
| PPE68_KO | -0.038 | -0.598 |
| glycerol2 | -0.248 | -0.518 |
| lignocerate | -0.552 | -0.921 |
| oleate | -0.163 | -0.081 |
| phosphatidylcholine | -0.464 | -0.801 |
| acetate | -0.329 | -1.094 |
| glucAc | -0.756 | -1.024 |
| Rv0950ko | 0.265 | 0.145 |
| Rv1096ko | 0.0 | 0.437 |
| Rv3684ko | 0.819 | 0.069 |
| delta_otsA_trehalose | -0.922 | -0.605 |