Top 10 genes with highest correlation to Rv0167/yrbE1A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0169/mce1A | (cc=0.8148) | info on Rv0169/mce1A |
| Rv0171/mce1C | (cc=0.7887) | info on Rv0171/mce1C |
| Rv0172/mce1D | (cc=0.7866) | info on Rv0172/mce1D |
| Rv0174/mce1F | (cc=0.7703) | info on Rv0174/mce1F |
| Rv0168/yrbE1B | (cc=0.7342) | info on Rv0168/yrbE1B |
| Rv0177/- | (cc=0.7314) | info on Rv0177/- |
| Rv0173/lprK | (cc=0.7281) | info on Rv0173/lprK |
| Rv0170/mce1B | (cc=0.7006) | info on Rv0170/mce1B |
| Rv0178/- | (cc=0.6838) | info on Rv0178/- |
| Rv0175/- | (cc=0.65) | info on Rv0175/- |
Correlation of Rv0167/yrbE1A with Rv0178/-
Normalized LFCs for Rv0167/yrbE1A:
(description and provenance of datasets)
| Rv0167/yrbE1A | Rv0178/- | |
| Fe_supp_jason_reseq | -0.614 | -0.677 |
| low_pH_jason_reseq | -0.594 | 0.813 |
| NO_jason_reseq | 1.323 | 2.662 |
| B6_jason_reseq | 0.217 | 0.114 |
| MHCII_jason_reseq | -1.98 | -1.968 |
| Isoniazid02 | 0.115 | -1.262 |
| Rifampicin4 | 1.069 | 1.527 |
| Ethambutol3 | -1.158 | -1.294 |
| Meropenem3 | 1.656 | 2.044 |
| Vancomycin16 | 1.451 | 1.22 |
| Rv2680_day32 | 0.736 | -1.573 |
| H37Rv_KO_MarP | 0.865 | 1.082 |
| hypoxia_3wks | 2.357 | 2.133 |
| hypoxia_6wks | 1.8 | 1.764 |
| glycerol | -2.396 | -0.958 |
| cholesterol | 0.751 | 0.27 |
| AJ | -0.151 | -0.274 |
| Bibs02 | -3.39 | -1.784 |
| Bibs02c | -2.61 | -2.402 |
| BL6 | 0.434 | -0.781 |
| BL6a | -1.398 | -2.395 |
| BXD01 | -0.445 | 0.246 |
| BXD010 | -0.531 | -0.962 |
| BXD011 | 0.137 | -0.467 |
| BXD03 | -0.222 | -0.828 |
| BXD04 | -0.444 | -0.261 |
| BXD05 | 0.183 | -0.695 |
| BXD06 | -1.752 | -1.155 |
| BXD07 | -0.323 | -0.337 |
| BXD08 | -0.331 | -1.298 |
| BXD09 | 0.053 | -0.245 |
| CAST | -0.869 | -1.093 |
| CCcont | -0.267 | -0.492 |
| DS01 | -2.496 | -1.649 |
| DS02 | -2.713 | -0.64 |
| DS04 | -0.247 | -0.675 |
| DS0c | -2.753 | -2.366 |
| GP01 | -1.274 | -1.049 |
| GP02 | -1.752 | -0.281 |
| GP0c | -0.75 | -0.074 |
| NOD | -1.129 | -0.963 |
| NZO | 0.146 | 0.984 |
| PWK | -2.407 | -1.408 |
| H37Rv_KO_CtpC | 0.02 | -1.417 |
| H37Rv_KO_CtpD | -0.017 | 0.013 |
| H37Rv_KO_Rv1272 | -0.092 | -0.257 |
| H37Rv_KO_SugABC | 1.678 | 1.406 |
| H37Rv_KO_MbtN | -1.037 | 0.027 |
| Trans05 | 0.657 | -0.696 |
| macrophage_unactivated | -1.203 | -0.41 |
| IL1 | -2.073 | -1.875 |
| Rapamycin | -1.93 | -2.489 |
| Tcell | -2.512 | -0.766 |
| GMCSF | 0.037 | -1.933 |
| IFNab | -0.716 | -0.71 |
| IFNg | -0.454 | -0.168 |
| IFNg_GMCSF1 | -0.584 | 0.047 |
| Rv1432_day32 | 0.31 | 0.632 |
| Rv1565c_day32 | -1.701 | -2.785 |
| secA2_input | -0.806 | -0.869 |
| delta_Rv3594 | 0.468 | 0.382 |
| delta_Rv3717 | -0.077 | 1.065 |
| delta_Rv3811 | -0.187 | 0.309 |
| delta_Rv0954 | 0.659 | 0.963 |
| PonA1 | 0.801 | 0.542 |
| EccD1_KO | -1.108 | 0.464 |
| EspI_KO | 0.471 | 0.04 |
| PE35_KO | -0.324 | 0.239 |
| PPE68_KO | 0.528 | 0.285 |
| glycerol2 | -0.82 | -1.352 |
| lignocerate | -2.34 | -3.514 |
| oleate | -1.307 | 0.648 |
| phosphatidylcholine | -1.042 | -1.538 |
| acetate | 0.69 | -0.953 |
| glucAc | 0.46 | -1.257 |
| Rv0950ko | -1.378 | -0.338 |
| Rv1096ko | -0.73 | -0.434 |
| Rv3684ko | -1.66 | 0.783 |
| delta_otsA_trehalose | -0.811 | -0.297 |