Top 10 genes with highest correlation to Rv0167/yrbE1A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0169/mce1A | (cc=0.8148) | info on Rv0169/mce1A |
| Rv0171/mce1C | (cc=0.7887) | info on Rv0171/mce1C |
| Rv0172/mce1D | (cc=0.7866) | info on Rv0172/mce1D |
| Rv0174/mce1F | (cc=0.7703) | info on Rv0174/mce1F |
| Rv0168/yrbE1B | (cc=0.7342) | info on Rv0168/yrbE1B |
| Rv0177/- | (cc=0.7314) | info on Rv0177/- |
| Rv0173/lprK | (cc=0.7281) | info on Rv0173/lprK |
| Rv0170/mce1B | (cc=0.7006) | info on Rv0170/mce1B |
| Rv0178/- | (cc=0.6838) | info on Rv0178/- |
| Rv0175/- | (cc=0.65) | info on Rv0175/- |
Correlation of Rv0167/yrbE1A with Rv0177/-
Normalized LFCs for Rv0167/yrbE1A:
(description and provenance of datasets)
| Rv0167/yrbE1A | Rv0177/- | |
| Fe_supp_jason_reseq | -0.614 | 1.246 |
| low_pH_jason_reseq | -0.594 | 0.308 |
| NO_jason_reseq | 1.323 | 2.625 |
| B6_jason_reseq | 0.217 | 1.323 |
| MHCII_jason_reseq | -1.98 | -1.067 |
| Isoniazid02 | 0.115 | -0.739 |
| Rifampicin4 | 1.069 | 1.47 |
| Ethambutol3 | -1.158 | -1.012 |
| Meropenem3 | 1.656 | 1.842 |
| Vancomycin16 | 1.451 | 1.65 |
| Rv2680_day32 | 0.736 | 2.782 |
| H37Rv_KO_MarP | 0.865 | 0.264 |
| hypoxia_3wks | 2.357 | 1.336 |
| hypoxia_6wks | 1.8 | 1.359 |
| glycerol | -2.396 | -0.263 |
| cholesterol | 0.751 | 0.556 |
| AJ | -0.151 | -0.345 |
| Bibs02 | -3.39 | -2.5 |
| Bibs02c | -2.61 | -2.448 |
| BL6 | 0.434 | -0.075 |
| BL6a | -1.398 | -2.451 |
| BXD01 | -0.445 | -0.944 |
| BXD010 | -0.531 | -1.216 |
| BXD011 | 0.137 | -0.304 |
| BXD03 | -0.222 | -1.084 |
| BXD04 | -0.444 | -1.845 |
| BXD05 | 0.183 | -0.865 |
| BXD06 | -1.752 | -1.583 |
| BXD07 | -0.323 | -0.903 |
| BXD08 | -0.331 | -1.113 |
| BXD09 | 0.053 | -1.176 |
| CAST | -0.869 | -1.121 |
| CCcont | -0.267 | -1.848 |
| DS01 | -2.496 | -2.404 |
| DS02 | -2.713 | -2.617 |
| DS04 | -0.247 | -0.756 |
| DS0c | -2.753 | -3.386 |
| GP01 | -1.274 | -1.43 |
| GP02 | -1.752 | -1.319 |
| GP0c | -0.75 | -1.399 |
| NOD | -1.129 | -1.272 |
| NZO | 0.146 | 1.81 |
| PWK | -2.407 | -1.485 |
| H37Rv_KO_CtpC | 0.02 | -1.586 |
| H37Rv_KO_CtpD | -0.017 | -1.567 |
| H37Rv_KO_Rv1272 | -0.092 | -0.687 |
| H37Rv_KO_SugABC | 1.678 | 0.629 |
| H37Rv_KO_MbtN | -1.037 | -0.281 |
| Trans05 | 0.657 | -0.294 |
| macrophage_unactivated | -1.203 | -1.354 |
| IL1 | -2.073 | -1.987 |
| Rapamycin | -1.93 | -2.056 |
| Tcell | -2.512 | -2.63 |
| GMCSF | 0.037 | -0.401 |
| IFNab | -0.716 | 0.242 |
| IFNg | -0.454 | -0.345 |
| IFNg_GMCSF1 | -0.584 | 0.129 |
| Rv1432_day32 | 0.31 | 0.795 |
| Rv1565c_day32 | -1.701 | -0.12 |
| secA2_input | -0.806 | -2.674 |
| delta_Rv3594 | 0.468 | 0.17 |
| delta_Rv3717 | -0.077 | 0.853 |
| delta_Rv3811 | -0.187 | -0.156 |
| delta_Rv0954 | 0.659 | 1.043 |
| PonA1 | 0.801 | -0.157 |
| EccD1_KO | -1.108 | -0.382 |
| EspI_KO | 0.471 | -0.128 |
| PE35_KO | -0.324 | -0.131 |
| PPE68_KO | 0.528 | 0.141 |
| glycerol2 | -0.82 | -1.197 |
| lignocerate | -2.34 | -2.809 |
| oleate | -1.307 | 0.631 |
| phosphatidylcholine | -1.042 | -1.627 |
| acetate | 0.69 | -0.447 |
| glucAc | 0.46 | -1.561 |
| Rv0950ko | -1.378 | -1.26 |
| Rv1096ko | -0.73 | -0.835 |
| Rv3684ko | -1.66 | -0.377 |
| delta_otsA_trehalose | -0.811 | -1.304 |