Top 10 genes with highest correlation to Rv0167/yrbE1A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0169/mce1A | (cc=0.8148) | info on Rv0169/mce1A |
| Rv0171/mce1C | (cc=0.7887) | info on Rv0171/mce1C |
| Rv0172/mce1D | (cc=0.7866) | info on Rv0172/mce1D |
| Rv0174/mce1F | (cc=0.7703) | info on Rv0174/mce1F |
| Rv0168/yrbE1B | (cc=0.7342) | info on Rv0168/yrbE1B |
| Rv0177/- | (cc=0.7314) | info on Rv0177/- |
| Rv0173/lprK | (cc=0.7281) | info on Rv0173/lprK |
| Rv0170/mce1B | (cc=0.7006) | info on Rv0170/mce1B |
| Rv0178/- | (cc=0.6838) | info on Rv0178/- |
| Rv0175/- | (cc=0.65) | info on Rv0175/- |
Correlation of Rv0167/yrbE1A with Rv0175/-
Normalized LFCs for Rv0167/yrbE1A:
(description and provenance of datasets)
| Rv0167/yrbE1A | Rv0175/- | |
| Fe_supp_jason_reseq | -0.614 | 1.246 |
| low_pH_jason_reseq | -0.594 | 1.593 |
| NO_jason_reseq | 1.323 | 2.646 |
| B6_jason_reseq | 0.217 | 0.925 |
| MHCII_jason_reseq | -1.98 | -1.677 |
| Isoniazid02 | 0.115 | 0.326 |
| Rifampicin4 | 1.069 | 0.977 |
| Ethambutol3 | -1.158 | -0.719 |
| Meropenem3 | 1.656 | 2.1 |
| Vancomycin16 | 1.451 | 1.703 |
| Rv2680_day32 | 0.736 | -1.938 |
| H37Rv_KO_MarP | 0.865 | -0.488 |
| hypoxia_3wks | 2.357 | 1.647 |
| hypoxia_6wks | 1.8 | 1.029 |
| glycerol | -2.396 | 1.685 |
| cholesterol | 0.751 | 1.833 |
| AJ | -0.151 | 0.343 |
| Bibs02 | -3.39 | -2.137 |
| Bibs02c | -2.61 | -2.98 |
| BL6 | 0.434 | -0.298 |
| BL6a | -1.398 | -2.061 |
| BXD01 | -0.445 | -0.142 |
| BXD010 | -0.531 | -0.338 |
| BXD011 | 0.137 | -0.446 |
| BXD03 | -0.222 | 0.273 |
| BXD04 | -0.444 | -0.05 |
| BXD05 | 0.183 | -0.854 |
| BXD06 | -1.752 | -0.602 |
| BXD07 | -0.323 | 0.222 |
| BXD08 | -0.331 | 0.457 |
| BXD09 | 0.053 | -0.624 |
| CAST | -0.869 | -2.077 |
| CCcont | -0.267 | -0.356 |
| DS01 | -2.496 | -1.795 |
| DS02 | -2.713 | -1.245 |
| DS04 | -0.247 | -0.474 |
| DS0c | -2.753 | -1.956 |
| GP01 | -1.274 | -1.594 |
| GP02 | -1.752 | -1.614 |
| GP0c | -0.75 | -2.012 |
| NOD | -1.129 | -2.276 |
| NZO | 0.146 | 0.861 |
| PWK | -2.407 | -2.322 |
| H37Rv_KO_CtpC | 0.02 | 0.139 |
| H37Rv_KO_CtpD | -0.017 | -1.042 |
| H37Rv_KO_Rv1272 | -0.092 | -0.68 |
| H37Rv_KO_SugABC | 1.678 | 1.091 |
| H37Rv_KO_MbtN | -1.037 | 0.806 |
| Trans05 | 0.657 | -0.007 |
| macrophage_unactivated | -1.203 | -1.676 |
| IL1 | -2.073 | -1.694 |
| Rapamycin | -1.93 | -1.507 |
| Tcell | -2.512 | -1.795 |
| GMCSF | 0.037 | -0.51 |
| IFNab | -0.716 | 0.623 |
| IFNg | -0.454 | 0.216 |
| IFNg_GMCSF1 | -0.584 | 0.295 |
| Rv1432_day32 | 0.31 | 0.252 |
| Rv1565c_day32 | -1.701 | -1.376 |
| secA2_input | -0.806 | -1.631 |
| delta_Rv3594 | 0.468 | 0.508 |
| delta_Rv3717 | -0.077 | 0.279 |
| delta_Rv3811 | -0.187 | 0.735 |
| delta_Rv0954 | 0.659 | 0.301 |
| PonA1 | 0.801 | 1.659 |
| EccD1_KO | -1.108 | -0.286 |
| EspI_KO | 0.471 | -0.114 |
| PE35_KO | -0.324 | -0.744 |
| PPE68_KO | 0.528 | 0.083 |
| glycerol2 | -0.82 | -0.464 |
| lignocerate | -2.34 | -2.39 |
| oleate | -1.307 | 0.308 |
| phosphatidylcholine | -1.042 | -1.038 |
| acetate | 0.69 | 0.547 |
| glucAc | 0.46 | 0.268 |
| Rv0950ko | -1.378 | 0.383 |
| Rv1096ko | -0.73 | 0.024 |
| Rv3684ko | -1.66 | 1.48 |
| delta_otsA_trehalose | -0.811 | 0.502 |