Top 10 genes with highest correlation to Rv0161/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.5952) | info on Rv1336/cysM |
| Rv3146/nuoB | (cc=0.5612) | info on Rv3146/nuoB |
| Rv3150/nuoF | (cc=0.5603) | info on Rv3150/nuoF |
| Rv1980c/mpt64 | (cc=0.5438) | info on Rv1980c/mpt64 |
| Rv1105/- | (cc=0.5405) | info on Rv1105/- |
| Rv0170/mce1B | (cc=0.5389) | info on Rv0170/mce1B |
| Rv2350c/plcB | (cc=0.5269) | info on Rv2350c/plcB |
| Rv3152/nuoH | (cc=0.5195) | info on Rv3152/nuoH |
| Rv2243/fabD | (cc=0.516) | info on Rv2243/fabD |
| Rv3151/nuoG | (cc=0.5114) | info on Rv3151/nuoG |
Correlation of Rv0161/- with Rv3150/nuoF
Normalized LFCs for Rv0161/-:
(description and provenance of datasets)
| Rv0161/- | Rv3150/nuoF | |
| Fe_supp_jason_reseq | -0.933 | -1.514 |
| low_pH_jason_reseq | -1.226 | -0.313 |
| NO_jason_reseq | 0.173 | -0.252 |
| B6_jason_reseq | -0.512 | -1.087 |
| MHCII_jason_reseq | -0.645 | -1.509 |
| Isoniazid02 | 0.208 | 0.611 |
| Rifampicin4 | 0.43 | 0.282 |
| Ethambutol3 | -0.118 | -0.595 |
| Meropenem3 | 0.211 | -0.847 |
| Vancomycin16 | 0.682 | -0.196 |
| Rv2680_day32 | 1.308 | 0.266 |
| H37Rv_KO_MarP | -0.023 | -0.246 |
| hypoxia_3wks | 1.228 | 1.097 |
| hypoxia_6wks | 1.865 | 0.754 |
| glycerol | -1.172 | -0.471 |
| cholesterol | 0.027 | -0.216 |
| AJ | -0.728 | -0.983 |
| Bibs02 | -0.348 | 0.55 |
| Bibs02c | 0.194 | -0.23 |
| BL6 | 0.639 | 1.845 |
| BL6a | 1.012 | 2.251 |
| BXD01 | 0.769 | 1.864 |
| BXD010 | 0.798 | 2.266 |
| BXD011 | 0.588 | 2.05 |
| BXD03 | 0.674 | 2.177 |
| BXD04 | 1.686 | 2.337 |
| BXD05 | 0.671 | 2.126 |
| BXD06 | 0.458 | 2.045 |
| BXD07 | 0.802 | 2.3 |
| BXD08 | 1.42 | 2.274 |
| BXD09 | 0.89 | 2.374 |
| CAST | -1.044 | 0.506 |
| CCcont | 0.763 | 1.451 |
| DS01 | -0.092 | 0.583 |
| DS02 | -0.315 | 0.147 |
| DS04 | -0.415 | 0.426 |
| DS0c | -0.363 | 0.969 |
| GP01 | -0.143 | 0.715 |
| GP02 | -0.121 | 0.875 |
| GP0c | 0.517 | 1.092 |
| NOD | 0.168 | -0.838 |
| NZO | 0.685 | 0.38 |
| PWK | 0.182 | -0.142 |
| H37Rv_KO_CtpC | 0.848 | 1.463 |
| H37Rv_KO_CtpD | 0.816 | 2.661 |
| H37Rv_KO_Rv1272 | 1.425 | 1.929 |
| H37Rv_KO_SugABC | -1.398 | 1.426 |
| H37Rv_KO_MbtN | -0.407 | 1.537 |
| Trans05 | 1.704 | 1.798 |
| macrophage_unactivated | -0.65 | 0.284 |
| IL1 | -0.854 | 0.267 |
| Rapamycin | -0.396 | 0.365 |
| Tcell | -0.182 | 0.746 |
| GMCSF | -0.673 | 0.388 |
| IFNab | -0.212 | 1.69 |
| IFNg | -0.037 | -0.302 |
| IFNg_GMCSF1 | -0.647 | 0.145 |
| Rv1432_day32 | -0.164 | 0.568 |
| Rv1565c_day32 | -0.938 | -0.208 |
| secA2_input | -1.047 | -0.116 |
| delta_Rv3594 | -0.307 | 0.392 |
| delta_Rv3717 | -0.112 | 0.299 |
| delta_Rv3811 | 0.427 | 0.094 |
| delta_Rv0954 | 0.143 | -0.057 |
| PonA1 | -0.547 | -0.39 |
| EccD1_KO | 0.243 | -0.474 |
| EspI_KO | 0.565 | -0.177 |
| PE35_KO | -0.181 | -0.467 |
| PPE68_KO | 0.048 | 0.0 |
| glycerol2 | 0.247 | 1.866 |
| lignocerate | -0.867 | -0.192 |
| oleate | 0.472 | 2.076 |
| phosphatidylcholine | -0.282 | -0.221 |
| acetate | -0.161 | -0.263 |
| glucAc | -0.143 | 0.587 |
| Rv0950ko | 0.0 | 0.311 |
| Rv1096ko | 0.917 | 0.639 |
| Rv3684ko | 0.802 | 0.098 |
| delta_otsA_trehalose | -0.413 | 0.965 |