Top 10 genes with highest correlation to Rv0161/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.5952) | info on Rv1336/cysM |
| Rv3146/nuoB | (cc=0.5612) | info on Rv3146/nuoB |
| Rv3150/nuoF | (cc=0.5603) | info on Rv3150/nuoF |
| Rv1980c/mpt64 | (cc=0.5438) | info on Rv1980c/mpt64 |
| Rv1105/- | (cc=0.5405) | info on Rv1105/- |
| Rv0170/mce1B | (cc=0.5389) | info on Rv0170/mce1B |
| Rv2350c/plcB | (cc=0.5269) | info on Rv2350c/plcB |
| Rv3152/nuoH | (cc=0.5195) | info on Rv3152/nuoH |
| Rv2243/fabD | (cc=0.516) | info on Rv2243/fabD |
| Rv3151/nuoG | (cc=0.5114) | info on Rv3151/nuoG |
Correlation of Rv0161/- with Rv1336/cysM
Normalized LFCs for Rv0161/-:
(description and provenance of datasets)
| Rv0161/- | Rv1336/cysM | |
| Fe_supp_jason_reseq | -0.933 | 0.199 |
| low_pH_jason_reseq | -1.226 | 0.831 |
| NO_jason_reseq | 0.173 | 1.113 |
| B6_jason_reseq | -0.512 | 0.705 |
| MHCII_jason_reseq | -0.645 | -0.079 |
| Isoniazid02 | 0.208 | 1.385 |
| Rifampicin4 | 0.43 | 0.076 |
| Ethambutol3 | -0.118 | -0.593 |
| Meropenem3 | 0.211 | 0.628 |
| Vancomycin16 | 0.682 | 0.666 |
| Rv2680_day32 | 1.308 | 0.675 |
| H37Rv_KO_MarP | -0.023 | -0.425 |
| hypoxia_3wks | 1.228 | 2.213 |
| hypoxia_6wks | 1.865 | 4.042 |
| glycerol | -1.172 | -0.967 |
| cholesterol | 0.027 | 0.048 |
| AJ | -0.728 | -1.56 |
| Bibs02 | -0.348 | -1.444 |
| Bibs02c | 0.194 | -1.203 |
| BL6 | 0.639 | 1.43 |
| BL6a | 1.012 | 1.05 |
| BXD01 | 0.769 | 2.221 |
| BXD010 | 0.798 | 1.974 |
| BXD011 | 0.588 | 3.102 |
| BXD03 | 0.674 | 1.156 |
| BXD04 | 1.686 | 1.994 |
| BXD05 | 0.671 | 1.724 |
| BXD06 | 0.458 | 2.328 |
| BXD07 | 0.802 | 2.6 |
| BXD08 | 1.42 | 2.71 |
| BXD09 | 0.89 | 1.771 |
| CAST | -1.044 | -0.594 |
| CCcont | 0.763 | 0.248 |
| DS01 | -0.092 | -1.632 |
| DS02 | -0.315 | -1.306 |
| DS04 | -0.415 | -0.136 |
| DS0c | -0.363 | -1.194 |
| GP01 | -0.143 | 1.134 |
| GP02 | -0.121 | 0.251 |
| GP0c | 0.517 | 1.595 |
| NOD | 0.168 | -1.128 |
| NZO | 0.685 | 0.23 |
| PWK | 0.182 | -0.469 |
| H37Rv_KO_CtpC | 0.848 | -0.578 |
| H37Rv_KO_CtpD | 0.816 | 0.006 |
| H37Rv_KO_Rv1272 | 1.425 | 1.298 |
| H37Rv_KO_SugABC | -1.398 | 0.836 |
| H37Rv_KO_MbtN | -0.407 | 2.209 |
| Trans05 | 1.704 | 1.733 |
| macrophage_unactivated | -0.65 | -2.061 |
| IL1 | -0.854 | -0.163 |
| Rapamycin | -0.396 | -0.915 |
| Tcell | -0.182 | 0.29 |
| GMCSF | -0.673 | -1.428 |
| IFNab | -0.212 | 0.115 |
| IFNg | -0.037 | -0.901 |
| IFNg_GMCSF1 | -0.647 | -1.024 |
| Rv1432_day32 | -0.164 | 0.846 |
| Rv1565c_day32 | -0.938 | -1.439 |
| secA2_input | -1.047 | 0.227 |
| delta_Rv3594 | -0.307 | 0.858 |
| delta_Rv3717 | -0.112 | 2.129 |
| delta_Rv3811 | 0.427 | 1.103 |
| delta_Rv0954 | 0.143 | -0.291 |
| PonA1 | -0.547 | -0.995 |
| EccD1_KO | 0.243 | 0.22 |
| EspI_KO | 0.565 | 0.088 |
| PE35_KO | -0.181 | -0.715 |
| PPE68_KO | 0.048 | 0.016 |
| glycerol2 | 0.247 | -0.206 |
| lignocerate | -0.867 | -2.133 |
| oleate | 0.472 | 2.606 |
| phosphatidylcholine | -0.282 | -1.732 |
| acetate | -0.161 | -0.073 |
| glucAc | -0.143 | -0.255 |
| Rv0950ko | 0.0 | -0.633 |
| Rv1096ko | 0.917 | -0.305 |
| Rv3684ko | 0.802 | 0.308 |
| delta_otsA_trehalose | -0.413 | -0.053 |