Top 10 genes with highest correlation to Rv0105c/rpmB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1447c/zwf2 | (cc=0.4102) | info on Rv1447c/zwf2 |
| Rv0044c/- | (cc=0.3916) | info on Rv0044c/- |
| Rv3321c/vapB44 | (cc=0.3752) | info on Rv3321c/vapB44 |
| Rv0006/gyrA | (cc=0.3647) | info on Rv0006/gyrA |
| Rv1769/- | (cc=0.3638) | info on Rv1769/- |
| Rv2798c/- | (cc=0.3624) | info on Rv2798c/- |
| Rv0697/- | (cc=0.3569) | info on Rv0697/- |
| Rv0317c/glpQ2 | (cc=0.3495) | info on Rv0317c/glpQ2 |
| Rv0691A/- | (cc=0.3484) | info on Rv0691A/- |
| Rv3807c/- | (cc=0.344) | info on Rv3807c/- |
Correlation of Rv0105c/rpmB1 with Rv3807c/-
Normalized LFCs for Rv0105c/rpmB1:
(description and provenance of datasets)
| Rv0105c/rpmB1 | Rv3807c/- | |
| Fe_supp_jason_reseq | 1.782 | 3.017 |
| low_pH_jason_reseq | 0.795 | -1.79 |
| NO_jason_reseq | -1.567 | 0.176 |
| B6_jason_reseq | 1.567 | 1.071 |
| MHCII_jason_reseq | 1.649 | 0.977 |
| Isoniazid02 | 0.147 | 0.642 |
| Rifampicin4 | 0.896 | -0.29 |
| Ethambutol3 | -0.478 | 0.711 |
| Meropenem3 | 0.503 | -0.128 |
| Vancomycin16 | 1.133 | -0.589 |
| Rv2680_day32 | -0.17 | 1.294 |
| H37Rv_KO_MarP | -0.048 | -1.699 |
| hypoxia_3wks | 0.558 | 2.265 |
| hypoxia_6wks | -0.324 | 1.391 |
| glycerol | -0.408 | -1.729 |
| cholesterol | 0.656 | -1.715 |
| AJ | -1.385 | -2.284 |
| Bibs02 | 1.968 | 2.215 |
| Bibs02c | -0.591 | -0.318 |
| BL6 | 0.585 | -1.706 |
| BL6a | -0.343 | -0.222 |
| BXD01 | 0.432 | -1.694 |
| BXD010 | -0.839 | 0.229 |
| BXD011 | 0.4 | -2.236 |
| BXD03 | 0.376 | -1.678 |
| BXD04 | 0.048 | -1.335 |
| BXD05 | -0.352 | 0.374 |
| BXD06 | -0.62 | -1.509 |
| BXD07 | -0.465 | -0.36 |
| BXD08 | 0.072 | -1.999 |
| BXD09 | -0.584 | -0.365 |
| CAST | 0.669 | -2.486 |
| CCcont | -0.712 | -1.279 |
| DS01 | -1.068 | -0.265 |
| DS02 | 0.44 | 0.663 |
| DS04 | -0.318 | -0.461 |
| DS0c | -1.486 | 1.263 |
| GP01 | 3.076 | 2.895 |
| GP02 | 0.206 | 0.889 |
| GP0c | 1.264 | 1.86 |
| NOD | -0.347 | -2.211 |
| NZO | -0.647 | -1.211 |
| PWK | 0.136 | -2.676 |
| H37Rv_KO_CtpC | 0.956 | -1.837 |
| H37Rv_KO_CtpD | 1.399 | -1.728 |
| H37Rv_KO_Rv1272 | 0.375 | -0.466 |
| H37Rv_KO_SugABC | -2.054 | -1.649 |
| H37Rv_KO_MbtN | -0.441 | 0.931 |
| Trans05 | -0.239 | 0.327 |
| macrophage_unactivated | 1.114 | -0.855 |
| IL1 | -1.388 | -2.394 |
| Rapamycin | -0.178 | -1.488 |
| Tcell | 0.57 | -1.219 |
| GMCSF | 0.0 | -1.133 |
| IFNab | 0.169 | 2.833 |
| IFNg | 0.037 | 0.609 |
| IFNg_GMCSF1 | 1.282 | -3.274 |
| Rv1432_day32 | -0.094 | -0.819 |
| Rv1565c_day32 | -0.706 | 0.0 |
| secA2_input | -0.869 | -1.061 |
| delta_Rv3594 | -0.422 | 3.295 |
| delta_Rv3717 | 1.354 | 3.809 |
| delta_Rv3811 | 1.89 | 5.154 |
| delta_Rv0954 | 1.708 | 3.545 |
| PonA1 | -0.074 | -1.154 |
| EccD1_KO | -0.109 | -1.151 |
| EspI_KO | -0.191 | -2.667 |
| PE35_KO | -0.995 | -2.981 |
| PPE68_KO | -0.474 | -2.857 |
| glycerol2 | 0.86 | -2.008 |
| lignocerate | 0.155 | -1.745 |
| oleate | 0.38 | -2.032 |
| phosphatidylcholine | 0.539 | -2.007 |
| acetate | -0.126 | -0.384 |
| glucAc | 0.277 | -1.481 |
| Rv0950ko | 0.446 | -2.268 |
| Rv1096ko | 0.654 | -2.045 |
| Rv3684ko | 0.891 | -0.547 |
| delta_otsA_trehalose | 2.478 | 0.366 |