Top 10 genes with highest correlation to Rv0105c/rpmB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1447c/zwf2 | (cc=0.4102) | info on Rv1447c/zwf2 |
| Rv0044c/- | (cc=0.3916) | info on Rv0044c/- |
| Rv3321c/vapB44 | (cc=0.3752) | info on Rv3321c/vapB44 |
| Rv0006/gyrA | (cc=0.3647) | info on Rv0006/gyrA |
| Rv1769/- | (cc=0.3638) | info on Rv1769/- |
| Rv2798c/- | (cc=0.3624) | info on Rv2798c/- |
| Rv0697/- | (cc=0.3569) | info on Rv0697/- |
| Rv0317c/glpQ2 | (cc=0.3495) | info on Rv0317c/glpQ2 |
| Rv0691A/- | (cc=0.3484) | info on Rv0691A/- |
| Rv3807c/- | (cc=0.344) | info on Rv3807c/- |
Correlation of Rv0105c/rpmB1 with Rv0691A/-
Normalized LFCs for Rv0105c/rpmB1:
(description and provenance of datasets)
| Rv0105c/rpmB1 | Rv0691A/- | |
| Fe_supp_jason_reseq | 1.782 | 1.449 |
| low_pH_jason_reseq | 0.795 | -1.188 |
| NO_jason_reseq | -1.567 | 0.0 |
| B6_jason_reseq | 1.567 | 1.554 |
| MHCII_jason_reseq | 1.649 | 0.545 |
| Isoniazid02 | 0.147 | 0.084 |
| Rifampicin4 | 0.896 | 0.344 |
| Ethambutol3 | -0.478 | 0.326 |
| Meropenem3 | 0.503 | 0.476 |
| Vancomycin16 | 1.133 | 0.992 |
| Rv2680_day32 | -0.17 | 0.0 |
| H37Rv_KO_MarP | -0.048 | -0.243 |
| hypoxia_3wks | 0.558 | -0.678 |
| hypoxia_6wks | -0.324 | 1.733 |
| glycerol | -0.408 | -0.023 |
| cholesterol | 0.656 | -2.556 |
| AJ | -1.385 | 0.077 |
| Bibs02 | 1.968 | -4.059 |
| Bibs02c | -0.591 | -2.176 |
| BL6 | 0.585 | -2.901 |
| BL6a | -0.343 | -2.87 |
| BXD01 | 0.432 | -3.021 |
| BXD010 | -0.839 | -2.971 |
| BXD011 | 0.4 | -1.044 |
| BXD03 | 0.376 | -3.137 |
| BXD04 | 0.048 | -1.684 |
| BXD05 | -0.352 | -2.987 |
| BXD06 | -0.62 | -2.441 |
| BXD07 | -0.465 | -2.443 |
| BXD08 | 0.072 | -3.085 |
| BXD09 | -0.584 | -3.26 |
| CAST | 0.669 | -2.396 |
| CCcont | -0.712 | -2.233 |
| DS01 | -1.068 | -2.057 |
| DS02 | 0.44 | 0.733 |
| DS04 | -0.318 | -0.441 |
| DS0c | -1.486 | -1.383 |
| GP01 | 3.076 | 0.837 |
| GP02 | 0.206 | -0.584 |
| GP0c | 1.264 | 1.651 |
| NOD | -0.347 | -2.203 |
| NZO | -0.647 | -1.313 |
| PWK | 0.136 | -0.186 |
| H37Rv_KO_CtpC | 0.956 | -3.458 |
| H37Rv_KO_CtpD | 1.399 | 0.448 |
| H37Rv_KO_Rv1272 | 0.375 | -0.899 |
| H37Rv_KO_SugABC | -2.054 | -2.298 |
| H37Rv_KO_MbtN | -0.441 | -2.108 |
| Trans05 | -0.239 | 0.677 |
| macrophage_unactivated | 1.114 | 2.273 |
| IL1 | -1.388 | 0.475 |
| Rapamycin | -0.178 | -0.267 |
| Tcell | 0.57 | -0.59 |
| GMCSF | 0.0 | -1.658 |
| IFNab | 0.169 | -0.263 |
| IFNg | 0.037 | -2.047 |
| IFNg_GMCSF1 | 1.282 | -0.569 |
| Rv1432_day32 | -0.094 | -0.155 |
| Rv1565c_day32 | -0.706 | 0.0 |
| secA2_input | -0.869 | -2.376 |
| delta_Rv3594 | -0.422 | 0.453 |
| delta_Rv3717 | 1.354 | 0.593 |
| delta_Rv3811 | 1.89 | 0.781 |
| delta_Rv0954 | 1.708 | 1.156 |
| PonA1 | -0.074 | 2.278 |
| EccD1_KO | -0.109 | -1.901 |
| EspI_KO | -0.191 | -1.968 |
| PE35_KO | -0.995 | -2.08 |
| PPE68_KO | -0.474 | -1.648 |
| glycerol2 | 0.86 | 1.073 |
| lignocerate | 0.155 | 0.32 |
| oleate | 0.38 | 0.0 |
| phosphatidylcholine | 0.539 | 0.819 |
| acetate | -0.126 | 0.0 |
| glucAc | 0.277 | 1.367 |
| Rv0950ko | 0.446 | -0.241 |
| Rv1096ko | 0.654 | -0.7 |
| Rv3684ko | 0.891 | 1.028 |
| delta_otsA_trehalose | 2.478 | 0.742 |