Top 10 genes with highest correlation to Rv0105c/rpmB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1447c/zwf2 | (cc=0.4102) | info on Rv1447c/zwf2 |
| Rv0044c/- | (cc=0.3916) | info on Rv0044c/- |
| Rv3321c/vapB44 | (cc=0.3752) | info on Rv3321c/vapB44 |
| Rv0006/gyrA | (cc=0.3647) | info on Rv0006/gyrA |
| Rv1769/- | (cc=0.3638) | info on Rv1769/- |
| Rv2798c/- | (cc=0.3624) | info on Rv2798c/- |
| Rv0697/- | (cc=0.3569) | info on Rv0697/- |
| Rv0317c/glpQ2 | (cc=0.3495) | info on Rv0317c/glpQ2 |
| Rv0691A/- | (cc=0.3484) | info on Rv0691A/- |
| Rv3807c/- | (cc=0.344) | info on Rv3807c/- |
Correlation of Rv0105c/rpmB1 with Rv0697/-
Normalized LFCs for Rv0105c/rpmB1:
(description and provenance of datasets)
| Rv0105c/rpmB1 | Rv0697/- | |
| Fe_supp_jason_reseq | 1.782 | 0.611 |
| low_pH_jason_reseq | 0.795 | 1.673 |
| NO_jason_reseq | -1.567 | 0.788 |
| B6_jason_reseq | 1.567 | 1.63 |
| MHCII_jason_reseq | 1.649 | 1.687 |
| Isoniazid02 | 0.147 | -1.104 |
| Rifampicin4 | 0.896 | -1.765 |
| Ethambutol3 | -0.478 | -1.063 |
| Meropenem3 | 0.503 | -0.662 |
| Vancomycin16 | 1.133 | -1.73 |
| Rv2680_day32 | -0.17 | -0.642 |
| H37Rv_KO_MarP | -0.048 | 0.35 |
| hypoxia_3wks | 0.558 | 0.459 |
| hypoxia_6wks | -0.324 | -0.549 |
| glycerol | -0.408 | -0.291 |
| cholesterol | 0.656 | -0.663 |
| AJ | -1.385 | -2.301 |
| Bibs02 | 1.968 | -0.744 |
| Bibs02c | -0.591 | 0.664 |
| BL6 | 0.585 | -1.479 |
| BL6a | -0.343 | 0.628 |
| BXD01 | 0.432 | -0.188 |
| BXD010 | -0.839 | -0.727 |
| BXD011 | 0.4 | -0.136 |
| BXD03 | 0.376 | -0.934 |
| BXD04 | 0.048 | -0.632 |
| BXD05 | -0.352 | -0.094 |
| BXD06 | -0.62 | -0.479 |
| BXD07 | -0.465 | -0.497 |
| BXD08 | 0.072 | 0.087 |
| BXD09 | -0.584 | -0.719 |
| CAST | 0.669 | -0.616 |
| CCcont | -0.712 | -1.765 |
| DS01 | -1.068 | -0.847 |
| DS02 | 0.44 | -0.314 |
| DS04 | -0.318 | -0.066 |
| DS0c | -1.486 | -1.362 |
| GP01 | 3.076 | -0.142 |
| GP02 | 0.206 | -0.756 |
| GP0c | 1.264 | -0.09 |
| NOD | -0.347 | -0.701 |
| NZO | -0.647 | -2.16 |
| PWK | 0.136 | 0.249 |
| H37Rv_KO_CtpC | 0.956 | -1.759 |
| H37Rv_KO_CtpD | 1.399 | 0.083 |
| H37Rv_KO_Rv1272 | 0.375 | -0.721 |
| H37Rv_KO_SugABC | -2.054 | -0.9 |
| H37Rv_KO_MbtN | -0.441 | -1.116 |
| Trans05 | -0.239 | -0.044 |
| macrophage_unactivated | 1.114 | 1.708 |
| IL1 | -1.388 | 1.032 |
| Rapamycin | -0.178 | 1.068 |
| Tcell | 0.57 | 0.411 |
| GMCSF | 0.0 | 1.545 |
| IFNab | 0.169 | 0.729 |
| IFNg | 0.037 | 0.93 |
| IFNg_GMCSF1 | 1.282 | 1.555 |
| Rv1432_day32 | -0.094 | -0.974 |
| Rv1565c_day32 | -0.706 | -0.186 |
| secA2_input | -0.869 | -2.325 |
| delta_Rv3594 | -0.422 | 0.295 |
| delta_Rv3717 | 1.354 | 0.457 |
| delta_Rv3811 | 1.89 | 0.416 |
| delta_Rv0954 | 1.708 | 0.57 |
| PonA1 | -0.074 | 1.213 |
| EccD1_KO | -0.109 | -1.194 |
| EspI_KO | -0.191 | -0.154 |
| PE35_KO | -0.995 | -1.263 |
| PPE68_KO | -0.474 | -0.944 |
| glycerol2 | 0.86 | 0.734 |
| lignocerate | 0.155 | -0.659 |
| oleate | 0.38 | 1.07 |
| phosphatidylcholine | 0.539 | 0.347 |
| acetate | -0.126 | -0.499 |
| glucAc | 0.277 | -0.701 |
| Rv0950ko | 0.446 | 0.534 |
| Rv1096ko | 0.654 | 0.697 |
| Rv3684ko | 0.891 | -0.21 |
| delta_otsA_trehalose | 2.478 | 1.179 |