Top 10 genes with highest correlation to Rv0099/fadD10:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0101/nrp | (cc=0.8187) | info on Rv0101/nrp |
| Rv0097/- | (cc=0.8068) | info on Rv0097/- |
| Rv2069/sigC | (cc=0.7462) | info on Rv2069/sigC |
| Rv0096/PPE1 | (cc=0.7008) | info on Rv0096/PPE1 |
| Rv0100/- | (cc=0.6974) | info on Rv0100/- |
| Rv0098/fcoT | (cc=0.6729) | info on Rv0098/fcoT |
| Rv3868/eccA1 | (cc=0.6255) | info on Rv3868/eccA1 |
| Rv1235/lpqY | (cc=0.6228) | info on Rv1235/lpqY |
| Rv1405c/- | (cc=0.5933) | info on Rv1405c/- |
| Rv1109c/- | (cc=0.5825) | info on Rv1109c/- |
Correlation of Rv0099/fadD10 with Rv0101/nrp
Normalized LFCs for Rv0099/fadD10:
(description and provenance of datasets)
| Rv0099/fadD10 | Rv0101/nrp | |
| Fe_supp_jason_reseq | 0.283 | -0.475 |
| low_pH_jason_reseq | -1.071 | 0.0 |
| NO_jason_reseq | 0.945 | 0.037 |
| B6_jason_reseq | -2.132 | -1.33 |
| MHCII_jason_reseq | -2.216 | -2.431 |
| Isoniazid02 | -0.931 | 0.493 |
| Rifampicin4 | -0.43 | -0.319 |
| Ethambutol3 | -0.445 | 0.604 |
| Meropenem3 | -0.506 | 0.788 |
| Vancomycin16 | -0.687 | -0.154 |
| Rv2680_day32 | -2.658 | -2.166 |
| H37Rv_KO_MarP | -0.223 | 0.257 |
| hypoxia_3wks | 0.471 | 0.06 |
| hypoxia_6wks | 0.361 | 0.0 |
| glycerol | -0.237 | -0.037 |
| cholesterol | 0.063 | 1.361 |
| AJ | -2.936 | -3.82 |
| Bibs02 | -0.676 | -1.358 |
| Bibs02c | -0.708 | -0.732 |
| BL6 | -0.677 | -1.049 |
| BL6a | -1.225 | -1.621 |
| BXD01 | -1.096 | -1.449 |
| BXD010 | 0.186 | -0.882 |
| BXD011 | -0.215 | -1.018 |
| BXD03 | -0.588 | -0.908 |
| BXD04 | -0.924 | -1.14 |
| BXD05 | -0.125 | -0.904 |
| BXD06 | -1.059 | -1.934 |
| BXD07 | -0.308 | -1.08 |
| BXD08 | -0.72 | -0.433 |
| BXD09 | -0.76 | -1.564 |
| CAST | -2.448 | -3.177 |
| CCcont | -0.332 | -0.599 |
| DS01 | -0.053 | 0.337 |
| DS02 | 0.84 | 1.878 |
| DS04 | -1.363 | -1.789 |
| DS0c | -0.482 | -0.226 |
| GP01 | -0.882 | -1.073 |
| GP02 | -0.993 | -1.148 |
| GP0c | 0.084 | -0.149 |
| NOD | -0.976 | -2.023 |
| NZO | -2.679 | -3.664 |
| PWK | -2.21 | -3.066 |
| H37Rv_KO_CtpC | -0.361 | -1.607 |
| H37Rv_KO_CtpD | 0.959 | -0.196 |
| H37Rv_KO_Rv1272 | -0.817 | -0.643 |
| H37Rv_KO_SugABC | 0.287 | 0.527 |
| H37Rv_KO_MbtN | 0.263 | 0.485 |
| Trans05 | 0.287 | -0.73 |
| macrophage_unactivated | 0.631 | 0.786 |
| IL1 | -1.142 | -0.653 |
| Rapamycin | -0.095 | -0.325 |
| Tcell | 0.824 | -0.228 |
| GMCSF | 1.624 | 0.911 |
| IFNab | 1.675 | 1.394 |
| IFNg | 1.368 | 0.219 |
| IFNg_GMCSF1 | 0.628 | 0.408 |
| Rv1432_day32 | -1.647 | -2.588 |
| Rv1565c_day32 | -3.601 | -3.349 |
| secA2_input | -0.193 | 0.348 |
| delta_Rv3594 | 0.04 | -0.257 |
| delta_Rv3717 | -0.534 | -0.045 |
| delta_Rv3811 | 0.187 | 0.152 |
| delta_Rv0954 | 0.876 | 0.152 |
| PonA1 | -2.163 | -1.675 |
| EccD1_KO | 0.385 | -0.132 |
| EspI_KO | -0.299 | -0.188 |
| PE35_KO | 0.0 | -0.155 |
| PPE68_KO | -0.198 | -0.211 |
| glycerol2 | -0.758 | 0.052 |
| lignocerate | -0.885 | -0.222 |
| oleate | -0.322 | -0.352 |
| phosphatidylcholine | -0.819 | -0.286 |
| acetate | 0.145 | -0.032 |
| glucAc | -1.097 | -0.02 |
| Rv0950ko | 0.063 | -0.096 |
| Rv1096ko | 0.247 | 1.028 |
| Rv3684ko | 0.524 | 0.403 |
| delta_otsA_trehalose | 0.289 | 0.119 |