Top 10 genes with highest correlation to Rv0071/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3612c/- | (cc=0.6207) | info on Rv3612c/- |
| Rv2651c/- | (cc=0.5984) | info on Rv2651c/- |
| Rv0237/lpqI | (cc=0.5977) | info on Rv0237/lpqI |
| Rv3450c/eccB4 | (cc=0.5688) | info on Rv3450c/eccB4 |
| Rv0918/- | (cc=0.5683) | info on Rv0918/- |
| Rv1181/pks4 | (cc=0.5651) | info on Rv1181/pks4 |
| Rv1184c/- | (cc=0.5614) | info on Rv1184c/- |
| Rv2636/- | (cc=0.5337) | info on Rv2636/- |
| Rv0856/- | (cc=0.5323) | info on Rv0856/- |
| Rv0601c/- | (cc=0.5215) | info on Rv0601c/- |
Correlation of Rv0071/- with Rv3450c/eccB4
Normalized LFCs for Rv0071/-:
(description and provenance of datasets)
| Rv0071/- | Rv3450c/eccB4 | |
| Fe_supp_jason_reseq | 0.624 | -0.294 |
| low_pH_jason_reseq | -0.139 | -0.761 |
| NO_jason_reseq | 0.517 | -0.572 |
| B6_jason_reseq | 1.764 | 0.09 |
| MHCII_jason_reseq | 1.675 | 0.893 |
| Isoniazid02 | 0.073 | 1.145 |
| Rifampicin4 | 0.75 | 1.099 |
| Ethambutol3 | 1.131 | 1.439 |
| Meropenem3 | 0.694 | -0.364 |
| Vancomycin16 | 0.218 | 0.077 |
| Rv2680_day32 | 1.537 | 2.022 |
| H37Rv_KO_MarP | 0.059 | 0.628 |
| hypoxia_3wks | -0.152 | 0.128 |
| hypoxia_6wks | -0.182 | -0.599 |
| glycerol | 1.16 | 0.813 |
| cholesterol | 1.207 | 0.263 |
| AJ | -0.504 | 0.225 |
| Bibs02 | 0.474 | 0.646 |
| Bibs02c | 0.887 | 0.793 |
| BL6 | 0.441 | -0.716 |
| BL6a | -0.265 | 0.64 |
| BXD01 | -0.919 | -0.257 |
| BXD010 | -0.781 | -0.786 |
| BXD011 | -0.745 | -0.567 |
| BXD03 | -1.044 | -0.66 |
| BXD04 | -0.664 | 0.024 |
| BXD05 | -0.091 | -0.31 |
| BXD06 | -0.636 | -0.719 |
| BXD07 | -0.722 | -0.374 |
| BXD08 | -0.8 | -0.231 |
| BXD09 | -0.69 | -0.459 |
| CAST | 0.235 | 0.14 |
| CCcont | -0.342 | -0.191 |
| DS01 | 0.301 | 0.666 |
| DS02 | 0.767 | 0.594 |
| DS04 | 0.51 | 0.422 |
| DS0c | -0.093 | 1.259 |
| GP01 | -2.601 | 0.045 |
| GP02 | -2.703 | 0.06 |
| GP0c | -1.661 | -0.834 |
| NOD | 1.694 | 0.225 |
| NZO | 0.027 | -0.247 |
| PWK | 0.443 | 0.232 |
| H37Rv_KO_CtpC | 0.0 | -0.844 |
| H37Rv_KO_CtpD | 0.247 | -0.035 |
| H37Rv_KO_Rv1272 | -0.757 | -0.76 |
| H37Rv_KO_SugABC | -0.655 | 0.078 |
| H37Rv_KO_MbtN | -0.546 | -0.902 |
| Trans05 | -0.911 | -0.82 |
| macrophage_unactivated | 0.085 | -0.347 |
| IL1 | 0.181 | 0.225 |
| Rapamycin | 0.779 | 0.939 |
| Tcell | -0.088 | -0.44 |
| GMCSF | 0.671 | 0.058 |
| IFNab | -0.366 | 0.659 |
| IFNg | -0.171 | -0.631 |
| IFNg_GMCSF1 | 0.776 | 0.035 |
| Rv1432_day32 | 0.426 | -0.284 |
| Rv1565c_day32 | 1.978 | 0.674 |
| secA2_input | 1.85 | 1.243 |
| delta_Rv3594 | -0.136 | -0.367 |
| delta_Rv3717 | -0.409 | -0.15 |
| delta_Rv3811 | -0.201 | -0.104 |
| delta_Rv0954 | 0.828 | -0.481 |
| PonA1 | 0.177 | 0.305 |
| EccD1_KO | -1.727 | -0.921 |
| EspI_KO | -1.931 | -1.32 |
| PE35_KO | -1.248 | -0.901 |
| PPE68_KO | -1.017 | -1.203 |
| glycerol2 | 0.422 | -0.01 |
| lignocerate | 0.559 | 0.337 |
| oleate | -0.903 | 0.238 |
| phosphatidylcholine | 0.172 | 0.472 |
| acetate | 0.321 | -0.14 |
| glucAc | 0.587 | -0.171 |
| Rv0950ko | 0.066 | -0.109 |
| Rv1096ko | 0.709 | 0.311 |
| Rv3684ko | -0.072 | -0.029 |
| delta_otsA_trehalose | 1.156 | 0.364 |