Top 10 genes with highest correlation to Rv0071/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3612c/- | (cc=0.6207) | info on Rv3612c/- |
| Rv2651c/- | (cc=0.5984) | info on Rv2651c/- |
| Rv0237/lpqI | (cc=0.5977) | info on Rv0237/lpqI |
| Rv3450c/eccB4 | (cc=0.5688) | info on Rv3450c/eccB4 |
| Rv0918/- | (cc=0.5683) | info on Rv0918/- |
| Rv1181/pks4 | (cc=0.5651) | info on Rv1181/pks4 |
| Rv1184c/- | (cc=0.5614) | info on Rv1184c/- |
| Rv2636/- | (cc=0.5337) | info on Rv2636/- |
| Rv0856/- | (cc=0.5323) | info on Rv0856/- |
| Rv0601c/- | (cc=0.5215) | info on Rv0601c/- |
Correlation of Rv0071/- with Rv1184c/-
Normalized LFCs for Rv0071/-:
(description and provenance of datasets)
| Rv0071/- | Rv1184c/- | |
| Fe_supp_jason_reseq | 0.624 | 1.708 |
| low_pH_jason_reseq | -0.139 | -0.694 |
| NO_jason_reseq | 0.517 | -0.399 |
| B6_jason_reseq | 1.764 | 1.187 |
| MHCII_jason_reseq | 1.675 | 1.676 |
| Isoniazid02 | 0.073 | -0.202 |
| Rifampicin4 | 0.75 | -1.335 |
| Ethambutol3 | 1.131 | -0.734 |
| Meropenem3 | 0.694 | -0.83 |
| Vancomycin16 | 0.218 | -0.316 |
| Rv2680_day32 | 1.537 | 0.241 |
| H37Rv_KO_MarP | 0.059 | 0.185 |
| hypoxia_3wks | -0.152 | 0.223 |
| hypoxia_6wks | -0.182 | -0.265 |
| glycerol | 1.16 | -0.443 |
| cholesterol | 1.207 | -0.372 |
| AJ | -0.504 | -0.953 |
| Bibs02 | 0.474 | -0.114 |
| Bibs02c | 0.887 | -0.62 |
| BL6 | 0.441 | -1.109 |
| BL6a | -0.265 | -1.478 |
| BXD01 | -0.919 | -2.236 |
| BXD010 | -0.781 | -1.344 |
| BXD011 | -0.745 | -1.279 |
| BXD03 | -1.044 | -1.588 |
| BXD04 | -0.664 | -1.554 |
| BXD05 | -0.091 | -0.796 |
| BXD06 | -0.636 | -1.975 |
| BXD07 | -0.722 | -1.52 |
| BXD08 | -0.8 | -1.833 |
| BXD09 | -0.69 | -1.349 |
| CAST | 0.235 | -1.8 |
| CCcont | -0.342 | -0.784 |
| DS01 | 0.301 | -0.443 |
| DS02 | 0.767 | -0.057 |
| DS04 | 0.51 | -0.898 |
| DS0c | -0.093 | 0.162 |
| GP01 | -2.601 | -1.674 |
| GP02 | -2.703 | -1.879 |
| GP0c | -1.661 | -2.176 |
| NOD | 1.694 | -0.771 |
| NZO | 0.027 | -1.12 |
| PWK | 0.443 | -1.189 |
| H37Rv_KO_CtpC | 0.0 | -1.612 |
| H37Rv_KO_CtpD | 0.247 | -1.315 |
| H37Rv_KO_Rv1272 | -0.757 | -1.713 |
| H37Rv_KO_SugABC | -0.655 | -1.303 |
| H37Rv_KO_MbtN | -0.546 | -0.742 |
| Trans05 | -0.911 | -0.537 |
| macrophage_unactivated | 0.085 | -1.654 |
| IL1 | 0.181 | 1.584 |
| Rapamycin | 0.779 | 0.822 |
| Tcell | -0.088 | -1.978 |
| GMCSF | 0.671 | -0.293 |
| IFNab | -0.366 | 0.698 |
| IFNg | -0.171 | -0.297 |
| IFNg_GMCSF1 | 0.776 | 0.097 |
| Rv1432_day32 | 0.426 | -1.902 |
| Rv1565c_day32 | 1.978 | 0.212 |
| secA2_input | 1.85 | -0.603 |
| delta_Rv3594 | -0.136 | 0.724 |
| delta_Rv3717 | -0.409 | 0.131 |
| delta_Rv3811 | -0.201 | -0.462 |
| delta_Rv0954 | 0.828 | 0.487 |
| PonA1 | 0.177 | 0.634 |
| EccD1_KO | -1.727 | -2.424 |
| EspI_KO | -1.931 | -0.516 |
| PE35_KO | -1.248 | -1.502 |
| PPE68_KO | -1.017 | -1.245 |
| glycerol2 | 0.422 | 0.247 |
| lignocerate | 0.559 | 0.485 |
| oleate | -0.903 | -1.168 |
| phosphatidylcholine | 0.172 | -0.511 |
| acetate | 0.321 | 0.389 |
| glucAc | 0.587 | 0.035 |
| Rv0950ko | 0.066 | -0.196 |
| Rv1096ko | 0.709 | 0.401 |
| Rv3684ko | -0.072 | -0.573 |
| delta_otsA_trehalose | 1.156 | 0.206 |