Top 10 genes with highest correlation to Rv0071/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3612c/- | (cc=0.6207) | info on Rv3612c/- |
| Rv2651c/- | (cc=0.5984) | info on Rv2651c/- |
| Rv0237/lpqI | (cc=0.5977) | info on Rv0237/lpqI |
| Rv3450c/eccB4 | (cc=0.5688) | info on Rv3450c/eccB4 |
| Rv0918/- | (cc=0.5683) | info on Rv0918/- |
| Rv1181/pks4 | (cc=0.5651) | info on Rv1181/pks4 |
| Rv1184c/- | (cc=0.5614) | info on Rv1184c/- |
| Rv2636/- | (cc=0.5337) | info on Rv2636/- |
| Rv0856/- | (cc=0.5323) | info on Rv0856/- |
| Rv0601c/- | (cc=0.5215) | info on Rv0601c/- |
Correlation of Rv0071/- with Rv2651c/-
Normalized LFCs for Rv0071/-:
(description and provenance of datasets)
| Rv0071/- | Rv2651c/- | |
| Fe_supp_jason_reseq | 0.624 | 1.086 |
| low_pH_jason_reseq | -0.139 | -1.419 |
| NO_jason_reseq | 0.517 | 1.394 |
| B6_jason_reseq | 1.764 | 2.983 |
| MHCII_jason_reseq | 1.675 | 2.155 |
| Isoniazid02 | 0.073 | 0.0 |
| Rifampicin4 | 0.75 | 0.0 |
| Ethambutol3 | 1.131 | 0.0 |
| Meropenem3 | 0.694 | 0.0 |
| Vancomycin16 | 0.218 | 0.0 |
| Rv2680_day32 | 1.537 | 0.0 |
| H37Rv_KO_MarP | 0.059 | 0.481 |
| hypoxia_3wks | -0.152 | 0.0 |
| hypoxia_6wks | -0.182 | 0.464 |
| glycerol | 1.16 | 0.862 |
| cholesterol | 1.207 | 0.55 |
| AJ | -0.504 | 1.193 |
| Bibs02 | 0.474 | 1.219 |
| Bibs02c | 0.887 | -1.325 |
| BL6 | 0.441 | -0.792 |
| BL6a | -0.265 | -1.914 |
| BXD01 | -0.919 | -2.32 |
| BXD010 | -0.781 | -1.823 |
| BXD011 | -0.745 | -2.099 |
| BXD03 | -1.044 | -2.286 |
| BXD04 | -0.664 | 0.32 |
| BXD05 | -0.091 | -3.372 |
| BXD06 | -0.636 | -1.178 |
| BXD07 | -0.722 | -1.714 |
| BXD08 | -0.8 | -1.573 |
| BXD09 | -0.69 | -2.15 |
| CAST | 0.235 | 0.874 |
| CCcont | -0.342 | -1.767 |
| DS01 | 0.301 | -0.902 |
| DS02 | 0.767 | -0.457 |
| DS04 | 0.51 | -0.512 |
| DS0c | -0.093 | 0.771 |
| GP01 | -2.601 | -2.573 |
| GP02 | -2.703 | -1.759 |
| GP0c | -1.661 | -3.388 |
| NOD | 1.694 | -1.352 |
| NZO | 0.027 | -0.549 |
| PWK | 0.443 | 0.034 |
| H37Rv_KO_CtpC | 0.0 | 0.014 |
| H37Rv_KO_CtpD | 0.247 | -3.301 |
| H37Rv_KO_Rv1272 | -0.757 | -3.675 |
| H37Rv_KO_SugABC | -0.655 | -2.233 |
| H37Rv_KO_MbtN | -0.546 | -2.249 |
| Trans05 | -0.911 | -3.405 |
| macrophage_unactivated | 0.085 | -0.754 |
| IL1 | 0.181 | 0.792 |
| Rapamycin | 0.779 | -1.007 |
| Tcell | -0.088 | 0.156 |
| GMCSF | 0.671 | 0.063 |
| IFNab | -0.366 | -0.151 |
| IFNg | -0.171 | 0.975 |
| IFNg_GMCSF1 | 0.776 | -0.572 |
| Rv1432_day32 | 0.426 | 0.0 |
| Rv1565c_day32 | 1.978 | 0.0 |
| secA2_input | 1.85 | 1.943 |
| delta_Rv3594 | -0.136 | 0.444 |
| delta_Rv3717 | -0.409 | 0.987 |
| delta_Rv3811 | -0.201 | -0.391 |
| delta_Rv0954 | 0.828 | 0.0 |
| PonA1 | 0.177 | -0.979 |
| EccD1_KO | -1.727 | -2.263 |
| EspI_KO | -1.931 | -2.447 |
| PE35_KO | -1.248 | -2.249 |
| PPE68_KO | -1.017 | -0.873 |
| glycerol2 | 0.422 | 0.0 |
| lignocerate | 0.559 | 0.712 |
| oleate | -0.903 | 0.0 |
| phosphatidylcholine | 0.172 | 0.193 |
| acetate | 0.321 | 1.779 |
| glucAc | 0.587 | 0.877 |
| Rv0950ko | 0.066 | -0.395 |
| Rv1096ko | 0.709 | -1.315 |
| Rv3684ko | -0.072 | -0.21 |
| delta_otsA_trehalose | 1.156 | -0.266 |