Top 10 genes with highest correlation to Rv0061c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2631/- | (cc=0.5636) | info on Rv2631/- |
| Rv3354/- | (cc=0.5387) | info on Rv3354/- |
| Rv2636/- | (cc=0.5365) | info on Rv2636/- |
| Rv1367c/- | (cc=0.517) | info on Rv1367c/- |
| Rv1250/- | (cc=0.5106) | info on Rv1250/- |
| Rv1999c/- | (cc=0.5044) | info on Rv1999c/- |
| Rv2032/acg | (cc=0.4962) | info on Rv2032/acg |
| Rv1708/- | (cc=0.4926) | info on Rv1708/- |
| Rv0840c/pip | (cc=0.4887) | info on Rv0840c/pip |
| Rv0089/- | (cc=0.4845) | info on Rv0089/- |
Correlation of Rv0061c/- with Rv3354/-
Normalized LFCs for Rv0061c/-:
(description and provenance of datasets)
| Rv0061c/- | Rv3354/- | |
| Fe_supp_jason_reseq | -0.827 | -1.138 |
| low_pH_jason_reseq | 0.09 | -0.381 |
| NO_jason_reseq | -0.89 | -0.793 |
| B6_jason_reseq | 0.974 | 0.985 |
| MHCII_jason_reseq | 0.728 | 1.019 |
| Isoniazid02 | 0.096 | 1.043 |
| Rifampicin4 | 0.59 | 0.125 |
| Ethambutol3 | -0.264 | 0.398 |
| Meropenem3 | 0.079 | 1.179 |
| Vancomycin16 | 0.175 | 0.162 |
| Rv2680_day32 | 0.882 | 0.659 |
| H37Rv_KO_MarP | 0.769 | 0.422 |
| hypoxia_3wks | 0.052 | -0.347 |
| hypoxia_6wks | -0.171 | -0.595 |
| glycerol | -1.258 | 0.674 |
| cholesterol | -0.425 | 0.892 |
| AJ | -1.756 | -0.171 |
| Bibs02 | 0.038 | -0.029 |
| Bibs02c | -0.514 | 0.596 |
| BL6 | -1.953 | -0.912 |
| BL6a | -0.595 | -0.067 |
| BXD01 | -0.876 | -1.687 |
| BXD010 | -0.602 | -1.434 |
| BXD011 | -1.819 | -2.812 |
| BXD03 | -3.298 | -2.487 |
| BXD04 | -1.33 | -1.729 |
| BXD05 | -2.2 | -1.146 |
| BXD06 | -2.022 | -1.932 |
| BXD07 | -2.669 | -2.262 |
| BXD08 | 0.135 | -1.667 |
| BXD09 | -1.533 | -2.542 |
| CAST | -0.489 | 0.097 |
| CCcont | -0.805 | -1.82 |
| DS01 | -0.051 | -0.077 |
| DS02 | 0.599 | 0.269 |
| DS04 | -0.15 | 0.395 |
| DS0c | 0.057 | -0.597 |
| GP01 | -0.726 | -1.486 |
| GP02 | -1.692 | -0.295 |
| GP0c | -1.38 | -0.754 |
| NOD | -0.161 | -0.169 |
| NZO | -0.747 | 0.127 |
| PWK | -0.467 | 0.367 |
| H37Rv_KO_CtpC | -2.741 | -0.788 |
| H37Rv_KO_CtpD | -3.022 | -1.146 |
| H37Rv_KO_Rv1272 | -0.934 | -0.927 |
| H37Rv_KO_SugABC | -1.279 | -0.855 |
| H37Rv_KO_MbtN | -2.135 | -1.624 |
| Trans05 | 1.568 | -0.244 |
| macrophage_unactivated | 0.215 | -1.654 |
| IL1 | -1.608 | -1.649 |
| Rapamycin | -1.743 | -1.034 |
| Tcell | -0.352 | -1.473 |
| GMCSF | -0.594 | -2.118 |
| IFNab | -2.769 | -2.056 |
| IFNg | -1.518 | -0.949 |
| IFNg_GMCSF1 | 0.053 | -0.641 |
| Rv1432_day32 | 0.505 | 0.3 |
| Rv1565c_day32 | -0.602 | 0.635 |
| secA2_input | 0.199 | 0.645 |
| delta_Rv3594 | -2.894 | -0.395 |
| delta_Rv3717 | -0.741 | -0.21 |
| delta_Rv3811 | -1.553 | 0.592 |
| delta_Rv0954 | -0.163 | 0.58 |
| PonA1 | -3.804 | -0.802 |
| EccD1_KO | -0.062 | 1.217 |
| EspI_KO | 0.314 | 1.201 |
| PE35_KO | 0.983 | 0.204 |
| PPE68_KO | 0.406 | 1.254 |
| glycerol2 | -0.099 | 1.595 |
| lignocerate | -0.235 | 1.672 |
| oleate | -0.781 | 0.822 |
| phosphatidylcholine | -0.581 | 1.291 |
| acetate | -0.047 | 1.047 |
| glucAc | 0.07 | 1.449 |
| Rv0950ko | -0.479 | 0.365 |
| Rv1096ko | -1.264 | 0.268 |
| Rv3684ko | -1.32 | 0.933 |
| delta_otsA_trehalose | -1.007 | 0.808 |