Top 10 genes with highest correlation to Rv0061c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2631/- | (cc=0.5636) | info on Rv2631/- |
| Rv3354/- | (cc=0.5387) | info on Rv3354/- |
| Rv2636/- | (cc=0.5365) | info on Rv2636/- |
| Rv1367c/- | (cc=0.517) | info on Rv1367c/- |
| Rv1250/- | (cc=0.5106) | info on Rv1250/- |
| Rv1999c/- | (cc=0.5044) | info on Rv1999c/- |
| Rv2032/acg | (cc=0.4962) | info on Rv2032/acg |
| Rv1708/- | (cc=0.4926) | info on Rv1708/- |
| Rv0840c/pip | (cc=0.4887) | info on Rv0840c/pip |
| Rv0089/- | (cc=0.4845) | info on Rv0089/- |
Correlation of Rv0061c/- with Rv1367c/-
Normalized LFCs for Rv0061c/-:
(description and provenance of datasets)
| Rv0061c/- | Rv1367c/- | |
| Fe_supp_jason_reseq | -0.827 | -0.668 |
| low_pH_jason_reseq | 0.09 | -0.621 |
| NO_jason_reseq | -0.89 | 0.102 |
| B6_jason_reseq | 0.974 | 0.32 |
| MHCII_jason_reseq | 0.728 | 0.499 |
| Isoniazid02 | 0.096 | 0.322 |
| Rifampicin4 | 0.59 | 0.574 |
| Ethambutol3 | -0.264 | 1.446 |
| Meropenem3 | 0.079 | 0.0 |
| Vancomycin16 | 0.175 | 0.265 |
| Rv2680_day32 | 0.882 | -0.364 |
| H37Rv_KO_MarP | 0.769 | 0.176 |
| hypoxia_3wks | 0.052 | 0.136 |
| hypoxia_6wks | -0.171 | -0.438 |
| glycerol | -1.258 | -0.073 |
| cholesterol | -0.425 | -0.132 |
| AJ | -1.756 | -0.314 |
| Bibs02 | 0.038 | -0.845 |
| Bibs02c | -0.514 | -0.4 |
| BL6 | -1.953 | -1.556 |
| BL6a | -0.595 | -0.476 |
| BXD01 | -0.876 | -0.868 |
| BXD010 | -0.602 | -0.751 |
| BXD011 | -1.819 | -0.447 |
| BXD03 | -3.298 | -1.169 |
| BXD04 | -1.33 | -0.891 |
| BXD05 | -2.2 | -0.533 |
| BXD06 | -2.022 | -0.746 |
| BXD07 | -2.669 | -0.944 |
| BXD08 | 0.135 | -0.416 |
| BXD09 | -1.533 | -1.607 |
| CAST | -0.489 | -0.624 |
| CCcont | -0.805 | -1.029 |
| DS01 | -0.051 | -0.156 |
| DS02 | 0.599 | -0.044 |
| DS04 | -0.15 | -0.094 |
| DS0c | 0.057 | 0.035 |
| GP01 | -0.726 | -0.481 |
| GP02 | -1.692 | 0.1 |
| GP0c | -1.38 | -0.119 |
| NOD | -0.161 | 0.026 |
| NZO | -0.747 | 0.329 |
| PWK | -0.467 | -0.655 |
| H37Rv_KO_CtpC | -2.741 | 0.075 |
| H37Rv_KO_CtpD | -3.022 | -0.046 |
| H37Rv_KO_Rv1272 | -0.934 | -0.075 |
| H37Rv_KO_SugABC | -1.279 | -0.189 |
| H37Rv_KO_MbtN | -2.135 | -1.426 |
| Trans05 | 1.568 | 0.417 |
| macrophage_unactivated | 0.215 | -0.789 |
| IL1 | -1.608 | -0.875 |
| Rapamycin | -1.743 | -1.154 |
| Tcell | -0.352 | -1.225 |
| GMCSF | -0.594 | -0.929 |
| IFNab | -2.769 | -1.433 |
| IFNg | -1.518 | -1.443 |
| IFNg_GMCSF1 | 0.053 | -0.619 |
| Rv1432_day32 | 0.505 | -0.593 |
| Rv1565c_day32 | -0.602 | 0.485 |
| secA2_input | 0.199 | 0.842 |
| delta_Rv3594 | -2.894 | -1.069 |
| delta_Rv3717 | -0.741 | -0.668 |
| delta_Rv3811 | -1.553 | -0.625 |
| delta_Rv0954 | -0.163 | -0.756 |
| PonA1 | -3.804 | -1.04 |
| EccD1_KO | -0.062 | 0.599 |
| EspI_KO | 0.314 | 0.345 |
| PE35_KO | 0.983 | 0.554 |
| PPE68_KO | 0.406 | 0.211 |
| glycerol2 | -0.099 | 0.448 |
| lignocerate | -0.235 | -0.057 |
| oleate | -0.781 | 0.595 |
| phosphatidylcholine | -0.581 | 0.682 |
| acetate | -0.047 | -0.344 |
| glucAc | 0.07 | 0.346 |
| Rv0950ko | -0.479 | -0.081 |
| Rv1096ko | -1.264 | 0.106 |
| Rv3684ko | -1.32 | 0.085 |
| delta_otsA_trehalose | -1.007 | -0.511 |