Top 10 genes with highest correlation to Rv0061c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2631/- | (cc=0.5636) | info on Rv2631/- |
Rv3354/- | (cc=0.5387) | info on Rv3354/- |
Rv2636/- | (cc=0.5365) | info on Rv2636/- |
Rv1367c/- | (cc=0.517) | info on Rv1367c/- |
Rv1250/- | (cc=0.5106) | info on Rv1250/- |
Rv1999c/- | (cc=0.5044) | info on Rv1999c/- |
Rv2032/acg | (cc=0.4962) | info on Rv2032/acg |
Rv1708/- | (cc=0.4926) | info on Rv1708/- |
Rv0840c/pip | (cc=0.4887) | info on Rv0840c/pip |
Rv0089/- | (cc=0.4845) | info on Rv0089/- |
Correlation of Rv0061c/- with Rv0089/-
Normalized LFCs for Rv0061c/-:
(description and provenance of datasets)
Rv0061c/- | Rv0089/- | |
Fe_supp_jason_reseq | -0.827 | -0.617 |
low_pH_jason_reseq | 0.09 | -0.221 |
NO_jason_reseq | -0.89 | 0.047 |
B6_jason_reseq | 0.974 | 0.241 |
MHCII_jason_reseq | 0.728 | 0.487 |
Isoniazid02 | 0.096 | 0.877 |
Rifampicin4 | 0.59 | -0.701 |
Ethambutol3 | -0.264 | -0.483 |
Meropenem3 | 0.079 | -0.564 |
Vancomycin16 | 0.175 | 0.0 |
Rv2680_day32 | 0.882 | 1.554 |
H37Rv_KO_MarP | 0.769 | 1.943 |
hypoxia_3wks | 0.052 | -0.59 |
hypoxia_6wks | -0.171 | -0.699 |
glycerol | -1.258 | -1.188 |
cholesterol | -0.425 | -0.61 |
AJ | -1.756 | 0.069 |
Bibs02 | 0.038 | 0.098 |
Bibs02c | -0.514 | 0.0 |
BL6 | -1.953 | -1.724 |
BL6a | -0.595 | -1.411 |
BXD01 | -0.876 | -1.681 |
BXD010 | -0.602 | -1.478 |
BXD011 | -1.819 | -1.727 |
BXD03 | -3.298 | -1.397 |
BXD04 | -1.33 | -0.973 |
BXD05 | -2.2 | -1.529 |
BXD06 | -2.022 | -1.642 |
BXD07 | -2.669 | -2.006 |
BXD08 | 0.135 | -2.382 |
BXD09 | -1.533 | -1.596 |
CAST | -0.489 | 0.492 |
CCcont | -0.805 | -0.977 |
DS01 | -0.051 | -0.209 |
DS02 | 0.599 | 0.153 |
DS04 | -0.15 | 0.462 |
DS0c | 0.057 | 0.308 |
GP01 | -0.726 | 0.326 |
GP02 | -1.692 | -1.336 |
GP0c | -1.38 | -0.489 |
NOD | -0.161 | 0.145 |
NZO | -0.747 | -0.1 |
PWK | -0.467 | 0.389 |
H37Rv_KO_CtpC | -2.741 | -1.138 |
H37Rv_KO_CtpD | -3.022 | -3.064 |
H37Rv_KO_Rv1272 | -0.934 | -0.742 |
H37Rv_KO_SugABC | -1.279 | -0.481 |
H37Rv_KO_MbtN | -2.135 | -1.571 |
Trans05 | 1.568 | 0.008 |
macrophage_unactivated | 0.215 | -2.727 |
IL1 | -1.608 | -1.246 |
Rapamycin | -1.743 | -2.071 |
Tcell | -0.352 | -1.3 |
GMCSF | -0.594 | -1.848 |
IFNab | -2.769 | -2.524 |
IFNg | -1.518 | -1.871 |
IFNg_GMCSF1 | 0.053 | -0.936 |
Rv1432_day32 | 0.505 | 0.301 |
Rv1565c_day32 | -0.602 | 0.594 |
secA2_input | 0.199 | -1.028 |
delta_Rv3594 | -2.894 | 0.0 |
delta_Rv3717 | -0.741 | -0.216 |
delta_Rv3811 | -1.553 | 0.755 |
delta_Rv0954 | -0.163 | 0.442 |
PonA1 | -3.804 | -0.308 |
EccD1_KO | -0.062 | -0.118 |
EspI_KO | 0.314 | 1.221 |
PE35_KO | 0.983 | 0.204 |
PPE68_KO | 0.406 | 1.497 |
glycerol2 | -0.099 | 1.494 |
lignocerate | -0.235 | 1.736 |
oleate | -0.781 | -0.505 |
phosphatidylcholine | -0.581 | 1.304 |
acetate | -0.047 | 2.168 |
glucAc | 0.07 | 1.508 |
Rv0950ko | -0.479 | -0.169 |
Rv1096ko | -1.264 | 0.983 |
Rv3684ko | -1.32 | 1.019 |
delta_otsA_trehalose | -1.007 | 1.304 |