Top 10 genes with highest correlation to Rv0061c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2631/- | (cc=0.5636) | info on Rv2631/- |
| Rv3354/- | (cc=0.5387) | info on Rv3354/- |
| Rv2636/- | (cc=0.5365) | info on Rv2636/- |
| Rv1367c/- | (cc=0.517) | info on Rv1367c/- |
| Rv1250/- | (cc=0.5106) | info on Rv1250/- |
| Rv1999c/- | (cc=0.5044) | info on Rv1999c/- |
| Rv2032/acg | (cc=0.4962) | info on Rv2032/acg |
| Rv1708/- | (cc=0.4926) | info on Rv1708/- |
| Rv0840c/pip | (cc=0.4887) | info on Rv0840c/pip |
| Rv0089/- | (cc=0.4845) | info on Rv0089/- |
Correlation of Rv0061c/- with Rv2631/-
Normalized LFCs for Rv0061c/-:
(description and provenance of datasets)
| Rv0061c/- | Rv2631/- | |
| Fe_supp_jason_reseq | -0.827 | -0.099 |
| low_pH_jason_reseq | 0.09 | 1.081 |
| NO_jason_reseq | -0.89 | 0.53 |
| B6_jason_reseq | 0.974 | -0.143 |
| MHCII_jason_reseq | 0.728 | 0.941 |
| Isoniazid02 | 0.096 | -0.016 |
| Rifampicin4 | 0.59 | 0.433 |
| Ethambutol3 | -0.264 | -0.066 |
| Meropenem3 | 0.079 | -0.202 |
| Vancomycin16 | 0.175 | 0.374 |
| Rv2680_day32 | 0.882 | 0.633 |
| H37Rv_KO_MarP | 0.769 | 0.454 |
| hypoxia_3wks | 0.052 | -0.347 |
| hypoxia_6wks | -0.171 | -0.297 |
| glycerol | -1.258 | -0.192 |
| cholesterol | -0.425 | -0.02 |
| AJ | -1.756 | -0.086 |
| Bibs02 | 0.038 | -0.424 |
| Bibs02c | -0.514 | -0.427 |
| BL6 | -1.953 | -0.555 |
| BL6a | -0.595 | -0.659 |
| BXD01 | -0.876 | -0.662 |
| BXD010 | -0.602 | -0.193 |
| BXD011 | -1.819 | -0.464 |
| BXD03 | -3.298 | -0.307 |
| BXD04 | -1.33 | -0.629 |
| BXD05 | -2.2 | -0.168 |
| BXD06 | -2.022 | -0.521 |
| BXD07 | -2.669 | -0.418 |
| BXD08 | 0.135 | -0.736 |
| BXD09 | -1.533 | -0.756 |
| CAST | -0.489 | 0.01 |
| CCcont | -0.805 | -0.861 |
| DS01 | -0.051 | 0.376 |
| DS02 | 0.599 | 0.03 |
| DS04 | -0.15 | 0.086 |
| DS0c | 0.057 | 0.134 |
| GP01 | -0.726 | -1.217 |
| GP02 | -1.692 | -0.399 |
| GP0c | -1.38 | -1.008 |
| NOD | -0.161 | 0.501 |
| NZO | -0.747 | -0.019 |
| PWK | -0.467 | -0.5 |
| H37Rv_KO_CtpC | -2.741 | -1.291 |
| H37Rv_KO_CtpD | -3.022 | 0.206 |
| H37Rv_KO_Rv1272 | -0.934 | 0.219 |
| H37Rv_KO_SugABC | -1.279 | -0.796 |
| H37Rv_KO_MbtN | -2.135 | -1.089 |
| Trans05 | 1.568 | -0.111 |
| macrophage_unactivated | 0.215 | 0.12 |
| IL1 | -1.608 | -0.448 |
| Rapamycin | -1.743 | -0.031 |
| Tcell | -0.352 | -0.775 |
| GMCSF | -0.594 | 0.05 |
| IFNab | -2.769 | -0.36 |
| IFNg | -1.518 | -0.347 |
| IFNg_GMCSF1 | 0.053 | 0.031 |
| Rv1432_day32 | 0.505 | 0.523 |
| Rv1565c_day32 | -0.602 | 0.035 |
| secA2_input | 0.199 | 0.271 |
| delta_Rv3594 | -2.894 | -0.655 |
| delta_Rv3717 | -0.741 | -0.208 |
| delta_Rv3811 | -1.553 | 0.0 |
| delta_Rv0954 | -0.163 | -0.827 |
| PonA1 | -3.804 | -1.618 |
| EccD1_KO | -0.062 | 0.73 |
| EspI_KO | 0.314 | 0.368 |
| PE35_KO | 0.983 | 0.869 |
| PPE68_KO | 0.406 | 0.586 |
| glycerol2 | -0.099 | 0.046 |
| lignocerate | -0.235 | 0.488 |
| oleate | -0.781 | -0.285 |
| phosphatidylcholine | -0.581 | 0.405 |
| acetate | -0.047 | -0.271 |
| glucAc | 0.07 | 0.0 |
| Rv0950ko | -0.479 | -0.262 |
| Rv1096ko | -1.264 | 0.0 |
| Rv3684ko | -1.32 | -0.776 |
| delta_otsA_trehalose | -1.007 | -0.05 |