Top 10 genes with highest correlation to Rv0017c/rodA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0016c/pbpA | (cc=0.8416) | info on Rv0016c/pbpA |
| Rv3630/- | (cc=0.6746) | info on Rv3630/- |
| Rv2004c/- | (cc=0.6604) | info on Rv2004c/- |
| Rv2190c/- | (cc=0.6412) | info on Rv2190c/- |
| Rv1836c/- | (cc=0.6403) | info on Rv1836c/- |
| Rv1821/secA2 | (cc=0.6302) | info on Rv1821/secA2 |
| Rv0050/ponA1 | (cc=0.6279) | info on Rv0050/ponA1 |
| Rv0989c/grcC2 | (cc=0.6156) | info on Rv0989c/grcC2 |
| Rv0820/phoT | (cc=0.6061) | info on Rv0820/phoT |
| Rv1566c/- | (cc=0.6002) | info on Rv1566c/- |
Correlation of Rv0017c/rodA with Rv1836c/-
Normalized LFCs for Rv0017c/rodA:
(description and provenance of datasets)
| Rv0017c/rodA | Rv1836c/- | |
| Fe_supp_jason_reseq | 2.392 | 3.703 |
| low_pH_jason_reseq | 2.923 | -0.44 |
| NO_jason_reseq | -0.281 | -0.69 |
| B6_jason_reseq | 0.0 | -0.292 |
| MHCII_jason_reseq | 0.503 | 0.492 |
| Isoniazid02 | -1.005 | -2.187 |
| Rifampicin4 | -2.32 | -2.943 |
| Ethambutol3 | -2.802 | -1.216 |
| Meropenem3 | -1.846 | -1.533 |
| Vancomycin16 | -4.6 | -2.653 |
| Rv2680_day32 | 1.168 | 1.226 |
| H37Rv_KO_MarP | -4.322 | -6.0 |
| hypoxia_3wks | 0.447 | -0.961 |
| hypoxia_6wks | 0.656 | -0.503 |
| glycerol | 1.891 | -0.202 |
| cholesterol | 1.357 | 0.253 |
| AJ | -0.866 | -0.232 |
| Bibs02 | 1.507 | -0.183 |
| Bibs02c | 0.488 | -0.209 |
| BL6 | 0.805 | 1.02 |
| BL6a | 0.769 | 1.339 |
| BXD01 | 1.247 | 1.272 |
| BXD010 | -0.141 | 0.323 |
| BXD011 | 0.54 | 1.988 |
| BXD03 | 0.424 | 0.341 |
| BXD04 | 0.236 | 0.563 |
| BXD05 | 0.903 | 1.21 |
| BXD06 | 0.254 | 0.523 |
| BXD07 | 0.323 | 0.865 |
| BXD08 | 0.653 | 1.248 |
| BXD09 | 0.14 | 0.95 |
| CAST | -0.39 | 0.21 |
| CCcont | 2.042 | 2.888 |
| DS01 | 0.83 | -0.236 |
| DS02 | -0.117 | -0.217 |
| DS04 | 0.822 | 0.883 |
| DS0c | 0.217 | 0.0 |
| GP01 | 1.006 | 0.964 |
| GP02 | -0.194 | 1.165 |
| GP0c | 1.008 | 1.002 |
| NOD | -0.524 | -0.225 |
| NZO | -1.246 | -0.199 |
| PWK | -1.225 | -0.196 |
| H37Rv_KO_CtpC | 0.571 | 0.739 |
| H37Rv_KO_CtpD | 1.363 | 0.918 |
| H37Rv_KO_Rv1272 | 0.824 | 0.953 |
| H37Rv_KO_SugABC | 0.453 | 1.362 |
| H37Rv_KO_MbtN | 0.943 | 1.116 |
| Trans05 | 0.642 | 1.066 |
| macrophage_unactivated | 0.385 | 0.669 |
| IL1 | -0.679 | 0.0 |
| Rapamycin | -1.363 | 0.227 |
| Tcell | 0.398 | 0.0 |
| GMCSF | -1.658 | 0.38 |
| IFNab | -0.13 | 1.844 |
| IFNg | -1.344 | 1.058 |
| IFNg_GMCSF1 | 0.258 | 0.452 |
| Rv1432_day32 | 2.066 | 1.748 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -2.537 | -2.174 |
| delta_Rv3594 | 0.737 | 2.695 |
| delta_Rv3717 | 0.369 | 3.555 |
| delta_Rv3811 | 1.068 | 2.842 |
| delta_Rv0954 | -2.989 | -1.461 |
| PonA1 | -2.28 | -1.387 |
| EccD1_KO | -0.921 | 0.148 |
| EspI_KO | -0.847 | -0.051 |
| PE35_KO | 0.505 | -1.496 |
| PPE68_KO | 0.349 | 0.0 |
| glycerol2 | -3.464 | -0.193 |
| lignocerate | -1.587 | -0.168 |
| oleate | -3.311 | -0.196 |
| phosphatidylcholine | -1.737 | -0.193 |
| acetate | -0.504 | 0.0 |
| glucAc | -0.083 | -0.143 |
| Rv0950ko | -1.716 | -6.0 |
| Rv1096ko | -1.007 | -0.03 |
| Rv3684ko | 0.488 | 1.677 |
| delta_otsA_trehalose | 1.148 | -0.288 |