Top 10 genes with highest correlation to Rv0017c/rodA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0016c/pbpA | (cc=0.8416) | info on Rv0016c/pbpA |
| Rv3630/- | (cc=0.6746) | info on Rv3630/- |
| Rv2004c/- | (cc=0.6604) | info on Rv2004c/- |
| Rv2190c/- | (cc=0.6412) | info on Rv2190c/- |
| Rv1836c/- | (cc=0.6403) | info on Rv1836c/- |
| Rv1821/secA2 | (cc=0.6302) | info on Rv1821/secA2 |
| Rv0050/ponA1 | (cc=0.6279) | info on Rv0050/ponA1 |
| Rv0989c/grcC2 | (cc=0.6156) | info on Rv0989c/grcC2 |
| Rv0820/phoT | (cc=0.6061) | info on Rv0820/phoT |
| Rv1566c/- | (cc=0.6002) | info on Rv1566c/- |
Correlation of Rv0017c/rodA with Rv0050/ponA1
Normalized LFCs for Rv0017c/rodA:
(description and provenance of datasets)
| Rv0017c/rodA | Rv0050/ponA1 | |
| Fe_supp_jason_reseq | 2.392 | 0.508 |
| low_pH_jason_reseq | 2.923 | 0.192 |
| NO_jason_reseq | -0.281 | -0.16 |
| B6_jason_reseq | 0.0 | 0.777 |
| MHCII_jason_reseq | 0.503 | 0.058 |
| Isoniazid02 | -1.005 | -1.202 |
| Rifampicin4 | -2.32 | -1.156 |
| Ethambutol3 | -2.802 | -0.711 |
| Meropenem3 | -1.846 | -0.237 |
| Vancomycin16 | -4.6 | -4.51 |
| Rv2680_day32 | 1.168 | 0.058 |
| H37Rv_KO_MarP | -4.322 | -3.768 |
| hypoxia_3wks | 0.447 | -0.443 |
| hypoxia_6wks | 0.656 | -1.059 |
| glycerol | 1.891 | -0.146 |
| cholesterol | 1.357 | 0.398 |
| AJ | -0.866 | -0.644 |
| Bibs02 | 1.507 | -1.597 |
| Bibs02c | 0.488 | -0.399 |
| BL6 | 0.805 | 0.47 |
| BL6a | 0.769 | 0.319 |
| BXD01 | 1.247 | 0.322 |
| BXD010 | -0.141 | 0.316 |
| BXD011 | 0.54 | 0.966 |
| BXD03 | 0.424 | 0.604 |
| BXD04 | 0.236 | 0.634 |
| BXD05 | 0.903 | 0.877 |
| BXD06 | 0.254 | 0.33 |
| BXD07 | 0.323 | 0.452 |
| BXD08 | 0.653 | 1.558 |
| BXD09 | 0.14 | 0.69 |
| CAST | -0.39 | -0.439 |
| CCcont | 2.042 | 1.278 |
| DS01 | 0.83 | -0.084 |
| DS02 | -0.117 | -0.704 |
| DS04 | 0.822 | -0.453 |
| DS0c | 0.217 | 0.652 |
| GP01 | 1.006 | 0.396 |
| GP02 | -0.194 | 1.958 |
| GP0c | 1.008 | 1.151 |
| NOD | -0.524 | -0.428 |
| NZO | -1.246 | -0.553 |
| PWK | -1.225 | -0.831 |
| H37Rv_KO_CtpC | 0.571 | 0.213 |
| H37Rv_KO_CtpD | 1.363 | 0.566 |
| H37Rv_KO_Rv1272 | 0.824 | 0.048 |
| H37Rv_KO_SugABC | 0.453 | 1.16 |
| H37Rv_KO_MbtN | 0.943 | 0.484 |
| Trans05 | 0.642 | 0.249 |
| macrophage_unactivated | 0.385 | 0.65 |
| IL1 | -0.679 | 0.418 |
| Rapamycin | -1.363 | 1.188 |
| Tcell | 0.398 | 0.459 |
| GMCSF | -1.658 | 0.283 |
| IFNab | -0.13 | 0.72 |
| IFNg | -1.344 | 0.551 |
| IFNg_GMCSF1 | 0.258 | 0.748 |
| Rv1432_day32 | 2.066 | -1.068 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -2.537 | -0.47 |
| delta_Rv3594 | 0.737 | 0.179 |
| delta_Rv3717 | 0.369 | -0.799 |
| delta_Rv3811 | 1.068 | 0.107 |
| delta_Rv0954 | -2.989 | -1.601 |
| PonA1 | -2.28 | -2.956 |
| EccD1_KO | -0.921 | -0.661 |
| EspI_KO | -0.847 | -0.761 |
| PE35_KO | 0.505 | -1.817 |
| PPE68_KO | 0.349 | -0.442 |
| glycerol2 | -3.464 | -1.582 |
| lignocerate | -1.587 | -1.61 |
| oleate | -3.311 | -1.733 |
| phosphatidylcholine | -1.737 | -2.001 |
| acetate | -0.504 | -0.291 |
| glucAc | -0.083 | -0.088 |
| Rv0950ko | -1.716 | -0.305 |
| Rv1096ko | -1.007 | -0.151 |
| Rv3684ko | 0.488 | 0.809 |
| delta_otsA_trehalose | 1.148 | 0.564 |