Top 10 genes with highest correlation to Rv0017c/rodA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0016c/pbpA | (cc=0.8416) | info on Rv0016c/pbpA |
| Rv3630/- | (cc=0.6746) | info on Rv3630/- |
| Rv2004c/- | (cc=0.6604) | info on Rv2004c/- |
| Rv2190c/- | (cc=0.6412) | info on Rv2190c/- |
| Rv1836c/- | (cc=0.6403) | info on Rv1836c/- |
| Rv1821/secA2 | (cc=0.6302) | info on Rv1821/secA2 |
| Rv0050/ponA1 | (cc=0.6279) | info on Rv0050/ponA1 |
| Rv0989c/grcC2 | (cc=0.6156) | info on Rv0989c/grcC2 |
| Rv0820/phoT | (cc=0.6061) | info on Rv0820/phoT |
| Rv1566c/- | (cc=0.6002) | info on Rv1566c/- |
Correlation of Rv0017c/rodA with Rv1566c/-
Normalized LFCs for Rv0017c/rodA:
(description and provenance of datasets)
| Rv0017c/rodA | Rv1566c/- | |
| Fe_supp_jason_reseq | 2.392 | 2.439 |
| low_pH_jason_reseq | 2.923 | 0.775 |
| NO_jason_reseq | -0.281 | -0.32 |
| B6_jason_reseq | 0.0 | -1.245 |
| MHCII_jason_reseq | 0.503 | 0.996 |
| Isoniazid02 | -1.005 | 0.936 |
| Rifampicin4 | -2.32 | -2.255 |
| Ethambutol3 | -2.802 | -1.097 |
| Meropenem3 | -1.846 | -1.109 |
| Vancomycin16 | -4.6 | -4.985 |
| Rv2680_day32 | 1.168 | -2.019 |
| H37Rv_KO_MarP | -4.322 | -2.066 |
| hypoxia_3wks | 0.447 | -0.08 |
| hypoxia_6wks | 0.656 | -1.566 |
| glycerol | 1.891 | -0.566 |
| cholesterol | 1.357 | 0.32 |
| AJ | -0.866 | -0.948 |
| Bibs02 | 1.507 | -0.057 |
| Bibs02c | 0.488 | 1.417 |
| BL6 | 0.805 | 0.423 |
| BL6a | 0.769 | 0.918 |
| BXD01 | 1.247 | 0.411 |
| BXD010 | -0.141 | 0.826 |
| BXD011 | 0.54 | 0.513 |
| BXD03 | 0.424 | 0.12 |
| BXD04 | 0.236 | 1.105 |
| BXD05 | 0.903 | 0.845 |
| BXD06 | 0.254 | -0.322 |
| BXD07 | 0.323 | 0.306 |
| BXD08 | 0.653 | 0.294 |
| BXD09 | 0.14 | 1.101 |
| CAST | -0.39 | -1.278 |
| CCcont | 2.042 | 2.871 |
| DS01 | 0.83 | 0.0 |
| DS02 | -0.117 | 0.0 |
| DS04 | 0.822 | -0.544 |
| DS0c | 0.217 | 0.066 |
| GP01 | 1.006 | -0.715 |
| GP02 | -0.194 | -0.169 |
| GP0c | 1.008 | -0.474 |
| NOD | -0.524 | -0.63 |
| NZO | -1.246 | -1.849 |
| PWK | -1.225 | -1.819 |
| H37Rv_KO_CtpC | 0.571 | 1.074 |
| H37Rv_KO_CtpD | 1.363 | 1.713 |
| H37Rv_KO_Rv1272 | 0.824 | -0.044 |
| H37Rv_KO_SugABC | 0.453 | 1.792 |
| H37Rv_KO_MbtN | 0.943 | 0.778 |
| Trans05 | 0.642 | 0.631 |
| macrophage_unactivated | 0.385 | 1.294 |
| IL1 | -0.679 | -1.231 |
| Rapamycin | -1.363 | -0.178 |
| Tcell | 0.398 | -1.437 |
| GMCSF | -1.658 | -0.481 |
| IFNab | -0.13 | 0.278 |
| IFNg | -1.344 | -0.604 |
| IFNg_GMCSF1 | 0.258 | -0.374 |
| Rv1432_day32 | 2.066 | -0.824 |
| Rv1565c_day32 | 0.0 | 0.442 |
| secA2_input | -2.537 | -0.809 |
| delta_Rv3594 | 0.737 | -0.038 |
| delta_Rv3717 | 0.369 | 0.211 |
| delta_Rv3811 | 1.068 | 0.152 |
| delta_Rv0954 | -2.989 | 0.986 |
| PonA1 | -2.28 | -0.219 |
| EccD1_KO | -0.921 | -0.148 |
| EspI_KO | -0.847 | -0.331 |
| PE35_KO | 0.505 | -0.201 |
| PPE68_KO | 0.349 | 0.454 |
| glycerol2 | -3.464 | -1.534 |
| lignocerate | -1.587 | -0.177 |
| oleate | -3.311 | -2.406 |
| phosphatidylcholine | -1.737 | -1.401 |
| acetate | -0.504 | 0.311 |
| glucAc | -0.083 | 0.207 |
| Rv0950ko | -1.716 | -3.673 |
| Rv1096ko | -1.007 | -0.283 |
| Rv3684ko | 0.488 | 0.455 |
| delta_otsA_trehalose | 1.148 | -0.562 |