Top 10 genes with highest correlation to Rv3922c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0149/- | (cc=0.592) | info on Rv0149/- |
| Rv1633/uvrB | (cc=0.5692) | info on Rv1633/uvrB |
| Rv0184/- | (cc=0.5587) | info on Rv0184/- |
| Rv2922c/smc | (cc=0.5558) | info on Rv2922c/smc |
| Rv3050c/- | (cc=0.5438) | info on Rv3050c/- |
| Rv0822c/- | (cc=0.5346) | info on Rv0822c/- |
| Rv2179c/- | (cc=0.5317) | info on Rv2179c/- |
| Rv3218/- | (cc=0.517) | info on Rv3218/- |
| Rv1059/- | (cc=0.5134) | info on Rv1059/- |
| Rv0930/pstA1 | (cc=0.5125) | info on Rv0930/pstA1 |
Correlation of Rv3922c/- with Rv2179c/-
Normalized LFCs for Rv3922c/-:
(description and provenance of datasets)
| Rv3922c/- | Rv2179c/- | |
| Fe_supp_jason_reseq | 0.36 | 0.655 |
| low_pH_jason_reseq | 0.763 | 1.233 |
| NO_jason_reseq | 0.41 | -1.536 |
| B6_jason_reseq | -0.538 | -0.496 |
| MHCII_jason_reseq | -1.397 | -0.572 |
| Isoniazid02 | 0.0 | -1.026 |
| Rifampicin4 | -1.072 | -4.473 |
| Ethambutol3 | -0.146 | 1.423 |
| Meropenem3 | 3.541 | 0.338 |
| Vancomycin16 | -1.475 | -4.247 |
| Rv2680_day32 | -0.6 | -0.249 |
| H37Rv_KO_MarP | -0.501 | -4.589 |
| hypoxia_3wks | -0.961 | -6.0 |
| hypoxia_6wks | -1.462 | -5.055 |
| glycerol | 0.41 | 1.972 |
| cholesterol | -0.112 | -0.145 |
| AJ | 0.324 | -0.232 |
| Bibs02 | 1.519 | -0.183 |
| Bibs02c | -0.336 | -0.209 |
| BL6 | 2.447 | 3.134 |
| BL6a | 1.36 | 0.776 |
| BXD01 | 1.838 | 2.751 |
| BXD010 | 1.265 | 1.471 |
| BXD011 | 1.398 | 0.795 |
| BXD03 | 1.078 | 1.509 |
| BXD04 | 0.942 | 3.583 |
| BXD05 | 0.975 | 1.21 |
| BXD06 | 1.016 | 3.86 |
| BXD07 | 1.367 | 1.245 |
| BXD08 | 1.493 | 3.613 |
| BXD09 | 1.018 | 1.657 |
| CAST | 1.396 | -0.23 |
| CCcont | 1.43 | 3.902 |
| DS01 | 0.881 | -0.236 |
| DS02 | 0.304 | -0.217 |
| DS04 | 1.093 | 2.459 |
| DS0c | 1.315 | -0.217 |
| GP01 | 1.518 | 0.508 |
| GP02 | 0.432 | 0.269 |
| GP0c | 2.402 | 0.119 |
| NOD | 0.314 | 1.282 |
| NZO | 0.0 | 0.0 |
| PWK | 0.142 | -0.196 |
| H37Rv_KO_CtpC | 0.519 | 0.835 |
| H37Rv_KO_CtpD | 1.052 | 0.651 |
| H37Rv_KO_Rv1272 | -0.356 | 0.725 |
| H37Rv_KO_SugABC | 1.276 | 2.752 |
| H37Rv_KO_MbtN | 0.487 | 4.067 |
| Trans05 | 2.815 | 0.947 |
| macrophage_unactivated | 0.193 | 3.156 |
| IL1 | 0.525 | 0.451 |
| Rapamycin | -1.608 | 1.63 |
| Tcell | 1.404 | 4.989 |
| GMCSF | 1.912 | -1.143 |
| IFNab | 0.535 | 0.157 |
| IFNg | 0.759 | -1.157 |
| IFNg_GMCSF1 | 0.556 | 0.163 |
| Rv1432_day32 | 1.451 | -0.763 |
| Rv1565c_day32 | -0.49 | 0.0 |
| secA2_input | 0.916 | -1.154 |
| delta_Rv3594 | 0.815 | 1.427 |
| delta_Rv3717 | 0.413 | 2.503 |
| delta_Rv3811 | 0.045 | 1.463 |
| delta_Rv0954 | 0.391 | -2.271 |
| PonA1 | 0.54 | -4.067 |
| EccD1_KO | -0.743 | -2.513 |
| EspI_KO | 1.05 | -1.095 |
| PE35_KO | -1.257 | 0.449 |
| PPE68_KO | 0.0 | 1.001 |
| glycerol2 | -1.279 | 0.352 |
| lignocerate | -1.583 | -3.383 |
| oleate | -1.55 | -5.721 |
| phosphatidylcholine | -2.158 | -3.891 |
| acetate | -0.499 | -0.981 |
| glucAc | -0.944 | -0.931 |
| Rv0950ko | -0.286 | -3.618 |
| Rv1096ko | 1.134 | -0.992 |
| Rv3684ko | 0.478 | -0.508 |
| delta_otsA_trehalose | 0.739 | 0.234 |