Top 10 genes with highest correlation to Rv3918c/parA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2164c/- | (cc=0.6919) | info on Rv2164c/- |
| Rv0541c/- | (cc=0.6191) | info on Rv0541c/- |
| Rv2678c/hemE | (cc=0.5747) | info on Rv2678c/hemE |
| Rv2785c/rpsO | (cc=0.5568) | info on Rv2785c/rpsO |
| Rv2697c/dut | (cc=0.5524) | info on Rv2697c/dut |
| Rv3208/- | (cc=0.5424) | info on Rv3208/- |
| Rv0092/ctpA | (cc=0.528) | info on Rv0092/ctpA |
| Rv1078/pra | (cc=0.5174) | info on Rv1078/pra |
| Rv3764c/tcrY | (cc=0.5166) | info on Rv3764c/tcrY |
| Rv0701/rplC | (cc=0.5156) | info on Rv0701/rplC |
Correlation of Rv3918c/parA with Rv1078/pra
Normalized LFCs for Rv3918c/parA:
(description and provenance of datasets)
| Rv3918c/parA | Rv1078/pra | |
| Fe_supp_jason_reseq | 0.182 | 0.766 |
| low_pH_jason_reseq | -0.211 | 0.0 |
| NO_jason_reseq | 0.302 | 0.0 |
| B6_jason_reseq | -0.292 | 0.0 |
| MHCII_jason_reseq | -0.257 | 0.0 |
| Isoniazid02 | 0.407 | 0.563 |
| Rifampicin4 | -0.29 | 0.073 |
| Ethambutol3 | 0.0 | 3.374 |
| Meropenem3 | 0.858 | 0.189 |
| Vancomycin16 | 0.0 | 0.143 |
| Rv2680_day32 | 0.101 | 0.0 |
| H37Rv_KO_MarP | -0.454 | -0.43 |
| hypoxia_3wks | 0.327 | -0.706 |
| hypoxia_6wks | -1.05 | -1.865 |
| glycerol | -0.353 | 0.0 |
| cholesterol | -0.398 | 0.276 |
| AJ | 0.504 | 0.0 |
| Bibs02 | 0.397 | 0.0 |
| Bibs02c | 0.162 | 0.0 |
| BL6 | -0.343 | 0.238 |
| BL6a | -0.544 | 0.544 |
| BXD01 | 0.194 | 0.13 |
| BXD010 | -0.224 | 0.128 |
| BXD011 | -0.35 | 0.0 |
| BXD03 | -0.371 | 0.135 |
| BXD04 | -0.34 | 0.0 |
| BXD05 | -0.369 | 0.256 |
| BXD06 | -0.366 | 0.366 |
| BXD07 | -0.242 | 0.264 |
| BXD08 | -0.365 | 0.0 |
| BXD09 | -0.386 | 0.69 |
| CAST | -0.402 | 0.0 |
| CCcont | 0.957 | 2.847 |
| DS01 | -0.197 | 0.0 |
| DS02 | -0.597 | 0.0 |
| DS04 | -0.533 | 1.192 |
| DS0c | 0.608 | 0.0 |
| GP01 | -0.271 | 0.0 |
| GP02 | -0.228 | 0.0 |
| GP0c | -0.357 | 0.0 |
| NOD | -0.617 | 0.0 |
| NZO | -0.348 | 0.0 |
| PWK | -0.163 | 0.0 |
| H37Rv_KO_CtpC | 0.0 | 0.446 |
| H37Rv_KO_CtpD | 0.43 | 0.348 |
| H37Rv_KO_Rv1272 | -0.117 | 0.141 |
| H37Rv_KO_SugABC | -0.272 | 1.534 |
| H37Rv_KO_MbtN | -0.086 | 1.52 |
| Trans05 | -0.359 | 0.0 |
| macrophage_unactivated | 0.436 | 1.196 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.0 | 0.45 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 0.0 | 0.0 |
| IFNg | 0.0 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.847 | 0.0 |
| secA2_input | 0.482 | 1.442 |
| delta_Rv3594 | 2.094 | 2.177 |
| delta_Rv3717 | 0.834 | 1.453 |
| delta_Rv3811 | 2.296 | 2.223 |
| delta_Rv0954 | 0.0 | -1.667 |
| PonA1 | 0.0 | -1.399 |
| EccD1_KO | -0.921 | -2.687 |
| EspI_KO | -0.95 | -3.2 |
| PE35_KO | -2.45 | -1.651 |
| PPE68_KO | -2.451 | -1.629 |
| glycerol2 | -0.224 | 0.649 |
| lignocerate | -0.807 | -1.266 |
| oleate | -0.94 | -0.802 |
| phosphatidylcholine | -0.929 | -1.964 |
| acetate | -1.31 | -0.133 |
| glucAc | -0.815 | -0.264 |
| Rv0950ko | 0.289 | -3.395 |
| Rv1096ko | -0.477 | -4.515 |
| Rv3684ko | -0.701 | -3.688 |
| delta_otsA_trehalose | 0.103 | 0.409 |