Top 10 genes with highest correlation to Rv3895c/eccB2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2065/cobH | (cc=0.4547) | info on Rv2065/cobH |
| Rv2701c/suhB | (cc=0.442) | info on Rv2701c/suhB |
| Rv0492c/- | (cc=0.437) | info on Rv0492c/- |
| Rv0317c/glpQ2 | (cc=0.4265) | info on Rv0317c/glpQ2 |
| Rv2005c/- | (cc=0.4222) | info on Rv2005c/- |
| Rv3704c/gshA | (cc=0.422) | info on Rv3704c/gshA |
| Rv0956/purN | (cc=0.4214) | info on Rv0956/purN |
| Rv3555c/- | (cc=0.4161) | info on Rv3555c/- |
| Rv0976c/- | (cc=0.4157) | info on Rv0976c/- |
| Rv0443/- | (cc=0.4098) | info on Rv0443/- |
Correlation of Rv3895c/eccB2 with Rv2005c/-
Normalized LFCs for Rv3895c/eccB2:
(description and provenance of datasets)
| Rv3895c/eccB2 | Rv2005c/- | |
| Fe_supp_jason_reseq | -1.569 | -0.245 |
| low_pH_jason_reseq | -0.458 | 0.335 |
| NO_jason_reseq | -0.352 | -0.473 |
| B6_jason_reseq | -0.57 | -0.051 |
| MHCII_jason_reseq | 0.035 | -0.773 |
| Isoniazid02 | -0.294 | 0.253 |
| Rifampicin4 | 0.412 | 0.084 |
| Ethambutol3 | -0.143 | 0.168 |
| Meropenem3 | -0.19 | 0.386 |
| Vancomycin16 | 0.074 | 0.0 |
| Rv2680_day32 | -0.659 | -0.199 |
| H37Rv_KO_MarP | 0.312 | 0.113 |
| hypoxia_3wks | -0.435 | -0.231 |
| hypoxia_6wks | -0.532 | -0.927 |
| glycerol | 0.674 | 0.177 |
| cholesterol | -0.074 | 1.572 |
| AJ | -0.136 | -0.519 |
| Bibs02 | -0.375 | -0.193 |
| Bibs02c | 0.721 | 0.236 |
| BL6 | 0.506 | 0.835 |
| BL6a | 0.327 | -0.151 |
| BXD01 | 0.246 | 0.0 |
| BXD010 | -0.533 | 0.102 |
| BXD011 | -0.329 | -0.161 |
| BXD03 | -0.153 | -0.907 |
| BXD04 | -0.082 | 0.826 |
| BXD05 | -0.464 | -0.364 |
| BXD06 | -0.528 | 0.139 |
| BXD07 | -0.02 | 0.11 |
| BXD08 | 0.127 | 0.522 |
| BXD09 | -0.228 | 0.0 |
| CAST | -0.492 | -0.108 |
| CCcont | -0.217 | -0.717 |
| DS01 | -0.325 | 1.128 |
| DS02 | 0.372 | 1.137 |
| DS04 | -0.415 | -0.128 |
| DS0c | -0.299 | 0.666 |
| GP01 | 0.473 | 0.733 |
| GP02 | 1.183 | 2.069 |
| GP0c | 0.322 | 0.899 |
| NOD | 0.809 | 0.965 |
| NZO | -0.874 | -0.253 |
| PWK | -0.402 | -0.331 |
| H37Rv_KO_CtpC | -0.072 | 0.059 |
| H37Rv_KO_CtpD | -0.009 | -0.342 |
| H37Rv_KO_Rv1272 | -0.159 | 0.453 |
| H37Rv_KO_SugABC | 0.707 | 0.829 |
| H37Rv_KO_MbtN | 0.243 | -0.243 |
| Trans05 | 0.535 | 0.959 |
| macrophage_unactivated | -0.969 | -0.764 |
| IL1 | -0.24 | 0.077 |
| Rapamycin | 0.35 | -0.424 |
| Tcell | -0.332 | -0.495 |
| GMCSF | -0.026 | 0.779 |
| IFNab | -0.278 | -0.121 |
| IFNg | -1.056 | -0.329 |
| IFNg_GMCSF1 | -0.255 | -0.525 |
| Rv1432_day32 | 0.473 | 0.484 |
| Rv1565c_day32 | -0.371 | -1.164 |
| secA2_input | 0.232 | -0.717 |
| delta_Rv3594 | -0.029 | 0.356 |
| delta_Rv3717 | 0.413 | -0.034 |
| delta_Rv3811 | 0.057 | -0.211 |
| delta_Rv0954 | -0.171 | -0.302 |
| PonA1 | -0.115 | 0.364 |
| EccD1_KO | -0.454 | -0.329 |
| EspI_KO | -0.394 | -0.385 |
| PE35_KO | -0.403 | 0.123 |
| PPE68_KO | 0.218 | -0.176 |
| glycerol2 | -0.202 | -0.832 |
| lignocerate | -0.301 | -0.792 |
| oleate | 0.291 | -1.72 |
| phosphatidylcholine | -0.202 | -0.889 |
| acetate | -0.713 | -1.518 |
| glucAc | -0.615 | -0.926 |
| Rv0950ko | 0.552 | -0.075 |
| Rv1096ko | 0.971 | 0.66 |
| Rv3684ko | 0.681 | -0.383 |
| delta_otsA_trehalose | 0.821 | -0.505 |