Top 10 genes with highest correlation to Rv3895c/eccB2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2065/cobH | (cc=0.4547) | info on Rv2065/cobH |
| Rv2701c/suhB | (cc=0.442) | info on Rv2701c/suhB |
| Rv0492c/- | (cc=0.437) | info on Rv0492c/- |
| Rv0317c/glpQ2 | (cc=0.4265) | info on Rv0317c/glpQ2 |
| Rv2005c/- | (cc=0.4222) | info on Rv2005c/- |
| Rv3704c/gshA | (cc=0.422) | info on Rv3704c/gshA |
| Rv0956/purN | (cc=0.4214) | info on Rv0956/purN |
| Rv3555c/- | (cc=0.4161) | info on Rv3555c/- |
| Rv0976c/- | (cc=0.4157) | info on Rv0976c/- |
| Rv0443/- | (cc=0.4098) | info on Rv0443/- |
Correlation of Rv3895c/eccB2 with Rv0956/purN
Normalized LFCs for Rv3895c/eccB2:
(description and provenance of datasets)
| Rv3895c/eccB2 | Rv0956/purN | |
| Fe_supp_jason_reseq | -1.569 | -0.573 |
| low_pH_jason_reseq | -0.458 | 0.793 |
| NO_jason_reseq | -0.352 | -0.446 |
| B6_jason_reseq | -0.57 | -0.788 |
| MHCII_jason_reseq | 0.035 | -0.829 |
| Isoniazid02 | -0.294 | 0.0 |
| Rifampicin4 | 0.412 | 0.311 |
| Ethambutol3 | -0.143 | 0.981 |
| Meropenem3 | -0.19 | 0.138 |
| Vancomycin16 | 0.074 | 0.854 |
| Rv2680_day32 | -0.659 | -0.672 |
| H37Rv_KO_MarP | 0.312 | 1.411 |
| hypoxia_3wks | -0.435 | -1.049 |
| hypoxia_6wks | -0.532 | -0.549 |
| glycerol | 0.674 | 0.0 |
| cholesterol | -0.074 | 0.398 |
| AJ | -0.136 | 0.0 |
| Bibs02 | -0.375 | 0.0 |
| Bibs02c | 0.721 | 0.209 |
| BL6 | 0.506 | 1.479 |
| BL6a | 0.327 | 0.839 |
| BXD01 | 0.246 | 1.134 |
| BXD010 | -0.533 | 0.0 |
| BXD011 | -0.329 | 0.127 |
| BXD03 | -0.153 | 0.0 |
| BXD04 | -0.082 | 0.124 |
| BXD05 | -0.464 | 0.827 |
| BXD06 | -0.528 | 0.741 |
| BXD07 | -0.02 | 0.929 |
| BXD08 | 0.127 | 1.217 |
| BXD09 | -0.228 | 0.494 |
| CAST | -0.492 | 0.0 |
| CCcont | -0.217 | 1.082 |
| DS01 | -0.325 | 0.0 |
| DS02 | 0.372 | 0.0 |
| DS04 | -0.415 | 0.37 |
| DS0c | -0.299 | 0.0 |
| GP01 | 0.473 | 1.2 |
| GP02 | 1.183 | 0.603 |
| GP0c | 0.322 | 2.738 |
| NOD | 0.809 | 0.0 |
| NZO | -0.874 | 0.0 |
| PWK | -0.402 | 0.831 |
| H37Rv_KO_CtpC | -0.072 | 0.162 |
| H37Rv_KO_CtpD | -0.009 | 0.778 |
| H37Rv_KO_Rv1272 | -0.159 | 0.0 |
| H37Rv_KO_SugABC | 0.707 | 2.14 |
| H37Rv_KO_MbtN | 0.243 | 1.183 |
| Trans05 | 0.535 | 0.554 |
| macrophage_unactivated | -0.969 | 0.0 |
| IL1 | -0.24 | -0.409 |
| Rapamycin | 0.35 | -0.424 |
| Tcell | -0.332 | 0.411 |
| GMCSF | -0.026 | -0.364 |
| IFNab | -0.278 | 0.0 |
| IFNg | -1.056 | 0.337 |
| IFNg_GMCSF1 | -0.255 | 0.0 |
| Rv1432_day32 | 0.473 | 0.0 |
| Rv1565c_day32 | -0.371 | -0.415 |
| secA2_input | 0.232 | 1.711 |
| delta_Rv3594 | -0.029 | 1.637 |
| delta_Rv3717 | 0.413 | 1.933 |
| delta_Rv3811 | 0.057 | 1.008 |
| delta_Rv0954 | -0.171 | 0.933 |
| PonA1 | -0.115 | -0.851 |
| EccD1_KO | -0.454 | 0.0 |
| EspI_KO | -0.394 | 0.633 |
| PE35_KO | -0.403 | 0.0 |
| PPE68_KO | 0.218 | 0.368 |
| glycerol2 | -0.202 | -0.193 |
| lignocerate | -0.301 | 0.0 |
| oleate | 0.291 | -0.196 |
| phosphatidylcholine | -0.202 | 0.0 |
| acetate | -0.713 | 0.0 |
| glucAc | -0.615 | 0.649 |
| Rv0950ko | 0.552 | 0.347 |
| Rv1096ko | 0.971 | 1.999 |
| Rv3684ko | 0.681 | 0.727 |
| delta_otsA_trehalose | 0.821 | 0.133 |