Top 10 genes with highest correlation to Rv3895c/eccB2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2065/cobH | (cc=0.4547) | info on Rv2065/cobH |
| Rv2701c/suhB | (cc=0.442) | info on Rv2701c/suhB |
| Rv0492c/- | (cc=0.437) | info on Rv0492c/- |
| Rv0317c/glpQ2 | (cc=0.4265) | info on Rv0317c/glpQ2 |
| Rv2005c/- | (cc=0.4222) | info on Rv2005c/- |
| Rv3704c/gshA | (cc=0.422) | info on Rv3704c/gshA |
| Rv0956/purN | (cc=0.4214) | info on Rv0956/purN |
| Rv3555c/- | (cc=0.4161) | info on Rv3555c/- |
| Rv0976c/- | (cc=0.4157) | info on Rv0976c/- |
| Rv0443/- | (cc=0.4098) | info on Rv0443/- |
Correlation of Rv3895c/eccB2 with Rv2065/cobH
Normalized LFCs for Rv3895c/eccB2:
(description and provenance of datasets)
| Rv3895c/eccB2 | Rv2065/cobH | |
| Fe_supp_jason_reseq | -1.569 | 1.088 |
| low_pH_jason_reseq | -0.458 | -0.883 |
| NO_jason_reseq | -0.352 | -0.173 |
| B6_jason_reseq | -0.57 | 0.635 |
| MHCII_jason_reseq | 0.035 | 0.568 |
| Isoniazid02 | -0.294 | 1.612 |
| Rifampicin4 | 0.412 | 0.961 |
| Ethambutol3 | -0.143 | 0.071 |
| Meropenem3 | -0.19 | 0.553 |
| Vancomycin16 | 0.074 | 0.817 |
| Rv2680_day32 | -0.659 | 0.67 |
| H37Rv_KO_MarP | 0.312 | 0.35 |
| hypoxia_3wks | -0.435 | -0.303 |
| hypoxia_6wks | -0.532 | -1.562 |
| glycerol | 0.674 | 1.023 |
| cholesterol | -0.074 | 1.205 |
| AJ | -0.136 | -0.155 |
| Bibs02 | -0.375 | 0.444 |
| Bibs02c | 0.721 | 1.079 |
| BL6 | 0.506 | -0.685 |
| BL6a | 0.327 | 0.73 |
| BXD01 | 0.246 | -0.291 |
| BXD010 | -0.533 | -0.537 |
| BXD011 | -0.329 | -0.614 |
| BXD03 | -0.153 | -1.216 |
| BXD04 | -0.082 | 1.751 |
| BXD05 | -0.464 | -1.111 |
| BXD06 | -0.528 | -0.713 |
| BXD07 | -0.02 | -0.836 |
| BXD08 | 0.127 | 0.34 |
| BXD09 | -0.228 | -0.996 |
| CAST | -0.492 | 0.23 |
| CCcont | -0.217 | -0.087 |
| DS01 | -0.325 | 0.529 |
| DS02 | 0.372 | 1.046 |
| DS04 | -0.415 | 0.318 |
| DS0c | -0.299 | 0.085 |
| GP01 | 0.473 | 1.468 |
| GP02 | 1.183 | 1.689 |
| GP0c | 0.322 | 1.738 |
| NOD | 0.809 | 0.643 |
| NZO | -0.874 | 0.11 |
| PWK | -0.402 | -0.131 |
| H37Rv_KO_CtpC | -0.072 | 0.076 |
| H37Rv_KO_CtpD | -0.009 | 0.75 |
| H37Rv_KO_Rv1272 | -0.159 | -0.022 |
| H37Rv_KO_SugABC | 0.707 | 0.308 |
| H37Rv_KO_MbtN | 0.243 | -0.18 |
| Trans05 | 0.535 | 1.34 |
| macrophage_unactivated | -0.969 | -0.991 |
| IL1 | -0.24 | 0.047 |
| Rapamycin | 0.35 | 0.279 |
| Tcell | -0.332 | -0.427 |
| GMCSF | -0.026 | -0.628 |
| IFNab | -0.278 | 0.45 |
| IFNg | -1.056 | -1.521 |
| IFNg_GMCSF1 | -0.255 | 0.239 |
| Rv1432_day32 | 0.473 | 0.544 |
| Rv1565c_day32 | -0.371 | -0.278 |
| secA2_input | 0.232 | 1.237 |
| delta_Rv3594 | -0.029 | -0.133 |
| delta_Rv3717 | 0.413 | 0.081 |
| delta_Rv3811 | 0.057 | 0.54 |
| delta_Rv0954 | -0.171 | 0.941 |
| PonA1 | -0.115 | 0.194 |
| EccD1_KO | -0.454 | -0.372 |
| EspI_KO | -0.394 | -0.639 |
| PE35_KO | -0.403 | 0.198 |
| PPE68_KO | 0.218 | -0.259 |
| glycerol2 | -0.202 | 0.0 |
| lignocerate | -0.301 | 0.112 |
| oleate | 0.291 | 0.445 |
| phosphatidylcholine | -0.202 | 0.483 |
| acetate | -0.713 | 0.211 |
| glucAc | -0.615 | 0.114 |
| Rv0950ko | 0.552 | 1.628 |
| Rv1096ko | 0.971 | 2.15 |
| Rv3684ko | 0.681 | 1.123 |
| delta_otsA_trehalose | 0.821 | -0.728 |