Top 10 genes with highest correlation to Rv3838c/pheA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1261c/- | (cc=0.345) | info on Rv1261c/- |
| Rv0400c/fadE7 | (cc=0.3417) | info on Rv0400c/fadE7 |
| Rv3672c/- | (cc=0.3398) | info on Rv3672c/- |
| Rv0345/- | (cc=0.3352) | info on Rv0345/- |
| Rv3040c/- | (cc=0.3317) | info on Rv3040c/- |
| Rv3828c/- | (cc=0.3292) | info on Rv3828c/- |
| Rv2070c/cobK | (cc=0.3215) | info on Rv2070c/cobK |
| Rv1494/mazE4 | (cc=0.3169) | info on Rv1494/mazE4 |
| Rv0626/vapB5 | (cc=0.3079) | info on Rv0626/vapB5 |
| Rv3140/fadE23 | (cc=0.3045) | info on Rv3140/fadE23 |
Correlation of Rv3838c/pheA with Rv3828c/-
Normalized LFCs for Rv3838c/pheA:
(description and provenance of datasets)
| Rv3838c/pheA | Rv3828c/- | |
| Fe_supp_jason_reseq | -0.854 | 0.605 |
| low_pH_jason_reseq | -0.323 | -0.462 |
| NO_jason_reseq | -0.507 | 1.31 |
| B6_jason_reseq | -0.752 | -2.443 |
| MHCII_jason_reseq | -0.663 | -2.152 |
| Isoniazid02 | 0.102 | 0.323 |
| Rifampicin4 | -0.2 | 0.601 |
| Ethambutol3 | 0.392 | 0.197 |
| Meropenem3 | -0.497 | -0.173 |
| Vancomycin16 | -0.621 | 0.403 |
| Rv2680_day32 | 0.0 | -0.249 |
| H37Rv_KO_MarP | 1.161 | 0.02 |
| hypoxia_3wks | 0.821 | 1.156 |
| hypoxia_6wks | -0.791 | 0.436 |
| glycerol | 1.138 | 0.908 |
| cholesterol | 0.614 | 0.637 |
| AJ | -0.18 | -0.114 |
| Bibs02 | -0.642 | -1.077 |
| Bibs02c | -0.735 | -0.249 |
| BL6 | -0.201 | 0.51 |
| BL6a | -0.319 | 0.212 |
| BXD01 | -0.209 | 1.416 |
| BXD010 | 0.777 | 0.928 |
| BXD011 | -0.448 | 0.881 |
| BXD03 | 1.553 | 0.692 |
| BXD04 | 0.173 | 1.772 |
| BXD05 | 0.758 | 0.701 |
| BXD06 | -0.215 | 0.808 |
| BXD07 | 1.197 | 0.652 |
| BXD08 | 0.096 | 1.454 |
| BXD09 | 0.792 | 0.983 |
| CAST | -0.809 | -0.537 |
| CCcont | 0.393 | 1.563 |
| DS01 | 1.432 | 0.183 |
| DS02 | -0.548 | -0.221 |
| DS04 | -0.312 | -2.02 |
| DS0c | 0.57 | -0.181 |
| GP01 | -0.347 | -1.513 |
| GP02 | -0.292 | -0.702 |
| GP0c | -0.101 | 0.157 |
| NOD | -0.789 | -0.617 |
| NZO | 1.29 | -0.311 |
| PWK | -0.494 | 0.598 |
| H37Rv_KO_CtpC | -0.571 | 1.041 |
| H37Rv_KO_CtpD | -0.319 | 1.225 |
| H37Rv_KO_Rv1272 | -0.356 | 2.032 |
| H37Rv_KO_SugABC | -0.348 | -0.136 |
| H37Rv_KO_MbtN | -0.362 | -0.161 |
| Trans05 | -0.329 | -0.359 |
| macrophage_unactivated | 0.0 | 1.168 |
| IL1 | 0.0 | 1.258 |
| Rapamycin | 0.252 | 0.924 |
| Tcell | 0.0 | 1.118 |
| GMCSF | 0.618 | 0.977 |
| IFNab | 2.016 | 1.623 |
| IFNg | -0.233 | 0.989 |
| IFNg_GMCSF1 | -0.273 | 0.217 |
| Rv1432_day32 | 0.0 | 0.18 |
| Rv1565c_day32 | 0.0 | 1.185 |
| secA2_input | -0.412 | -1.766 |
| delta_Rv3594 | -0.742 | -0.344 |
| delta_Rv3717 | -0.135 | -0.38 |
| delta_Rv3811 | 0.149 | 0.07 |
| delta_Rv0954 | 0.842 | 1.757 |
| PonA1 | 1.031 | 1.173 |
| EccD1_KO | 1.924 | 0.168 |
| EspI_KO | 0.285 | 0.342 |
| PE35_KO | 0.0 | 0.878 |
| PPE68_KO | -0.71 | 0.989 |
| glycerol2 | 0.0 | -0.528 |
| lignocerate | 0.168 | -0.476 |
| oleate | 0.0 | -0.03 |
| phosphatidylcholine | 0.0 | -0.401 |
| acetate | 0.229 | -0.977 |
| glucAc | 0.392 | -0.92 |
| Rv0950ko | -0.971 | 0.277 |
| Rv1096ko | 0.546 | 0.277 |
| Rv3684ko | 1.117 | 1.539 |
| delta_otsA_trehalose | -0.133 | 0.133 |