Top 10 genes with highest correlation to Rv3838c/pheA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1261c/- | (cc=0.345) | info on Rv1261c/- |
| Rv0400c/fadE7 | (cc=0.3417) | info on Rv0400c/fadE7 |
| Rv3672c/- | (cc=0.3398) | info on Rv3672c/- |
| Rv0345/- | (cc=0.3352) | info on Rv0345/- |
| Rv3040c/- | (cc=0.3317) | info on Rv3040c/- |
| Rv3828c/- | (cc=0.3292) | info on Rv3828c/- |
| Rv2070c/cobK | (cc=0.3215) | info on Rv2070c/cobK |
| Rv1494/mazE4 | (cc=0.3169) | info on Rv1494/mazE4 |
| Rv0626/vapB5 | (cc=0.3079) | info on Rv0626/vapB5 |
| Rv3140/fadE23 | (cc=0.3045) | info on Rv3140/fadE23 |
Correlation of Rv3838c/pheA with Rv0345/-
Normalized LFCs for Rv3838c/pheA:
(description and provenance of datasets)
| Rv3838c/pheA | Rv0345/- | |
| Fe_supp_jason_reseq | -0.854 | -1.162 |
| low_pH_jason_reseq | -0.323 | 0.11 |
| NO_jason_reseq | -0.507 | -0.333 |
| B6_jason_reseq | -0.752 | -0.629 |
| MHCII_jason_reseq | -0.663 | -0.894 |
| Isoniazid02 | 0.102 | -0.079 |
| Rifampicin4 | -0.2 | 0.393 |
| Ethambutol3 | 0.392 | -0.134 |
| Meropenem3 | -0.497 | -2.078 |
| Vancomycin16 | -0.621 | -0.366 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 1.161 | 0.56 |
| hypoxia_3wks | 0.821 | -0.379 |
| hypoxia_6wks | -0.791 | 0.058 |
| glycerol | 1.138 | -0.822 |
| cholesterol | 0.614 | -0.168 |
| AJ | -0.18 | 0.435 |
| Bibs02 | -0.642 | -0.899 |
| Bibs02c | -0.735 | -1.194 |
| BL6 | -0.201 | 0.936 |
| BL6a | -0.319 | -0.214 |
| BXD01 | -0.209 | 0.547 |
| BXD010 | 0.777 | 0.72 |
| BXD011 | -0.448 | 0.438 |
| BXD03 | 1.553 | 0.651 |
| BXD04 | 0.173 | 0.676 |
| BXD05 | 0.758 | 0.077 |
| BXD06 | -0.215 | 0.58 |
| BXD07 | 1.197 | 0.882 |
| BXD08 | 0.096 | 0.024 |
| BXD09 | 0.792 | 0.188 |
| CAST | -0.809 | -0.017 |
| CCcont | 0.393 | 0.624 |
| DS01 | 1.432 | -0.255 |
| DS02 | -0.548 | -0.599 |
| DS04 | -0.312 | -0.409 |
| DS0c | 0.57 | -0.244 |
| GP01 | -0.347 | -0.429 |
| GP02 | -0.292 | -0.955 |
| GP0c | -0.101 | -0.178 |
| NOD | -0.789 | 0.737 |
| NZO | 1.29 | 0.249 |
| PWK | -0.494 | 1.034 |
| H37Rv_KO_CtpC | -0.571 | -0.828 |
| H37Rv_KO_CtpD | -0.319 | -1.374 |
| H37Rv_KO_Rv1272 | -0.356 | 0.34 |
| H37Rv_KO_SugABC | -0.348 | -0.837 |
| H37Rv_KO_MbtN | -0.362 | -1.812 |
| Trans05 | -0.329 | 0.136 |
| macrophage_unactivated | 0.0 | -0.644 |
| IL1 | 0.0 | 0.059 |
| Rapamycin | 0.252 | 0.242 |
| Tcell | 0.0 | 0.091 |
| GMCSF | 0.618 | 0.628 |
| IFNab | 2.016 | 0.036 |
| IFNg | -0.233 | 0.107 |
| IFNg_GMCSF1 | -0.273 | 0.377 |
| Rv1432_day32 | 0.0 | 0.781 |
| Rv1565c_day32 | 0.0 | -0.152 |
| secA2_input | -0.412 | 0.681 |
| delta_Rv3594 | -0.742 | -0.584 |
| delta_Rv3717 | -0.135 | -1.12 |
| delta_Rv3811 | 0.149 | 0.205 |
| delta_Rv0954 | 0.842 | -0.346 |
| PonA1 | 1.031 | 1.202 |
| EccD1_KO | 1.924 | 0.145 |
| EspI_KO | 0.285 | -0.339 |
| PE35_KO | 0.0 | -1.438 |
| PPE68_KO | -0.71 | -1.549 |
| glycerol2 | 0.0 | 0.653 |
| lignocerate | 0.168 | 1.209 |
| oleate | 0.0 | -0.271 |
| phosphatidylcholine | 0.0 | 0.798 |
| acetate | 0.229 | 1.086 |
| glucAc | 0.392 | 0.605 |
| Rv0950ko | -0.971 | -0.244 |
| Rv1096ko | 0.546 | 0.404 |
| Rv3684ko | 1.117 | 0.17 |
| delta_otsA_trehalose | -0.133 | -0.657 |