Top 10 genes with highest correlation to Rv3838c/pheA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1261c/- | (cc=0.345) | info on Rv1261c/- |
| Rv0400c/fadE7 | (cc=0.3417) | info on Rv0400c/fadE7 |
| Rv3672c/- | (cc=0.3398) | info on Rv3672c/- |
| Rv0345/- | (cc=0.3352) | info on Rv0345/- |
| Rv3040c/- | (cc=0.3317) | info on Rv3040c/- |
| Rv3828c/- | (cc=0.3292) | info on Rv3828c/- |
| Rv2070c/cobK | (cc=0.3215) | info on Rv2070c/cobK |
| Rv1494/mazE4 | (cc=0.3169) | info on Rv1494/mazE4 |
| Rv0626/vapB5 | (cc=0.3079) | info on Rv0626/vapB5 |
| Rv3140/fadE23 | (cc=0.3045) | info on Rv3140/fadE23 |
Correlation of Rv3838c/pheA with Rv1261c/-
Normalized LFCs for Rv3838c/pheA:
(description and provenance of datasets)
| Rv3838c/pheA | Rv1261c/- | |
| Fe_supp_jason_reseq | -0.854 | -0.518 |
| low_pH_jason_reseq | -0.323 | -0.601 |
| NO_jason_reseq | -0.507 | -0.231 |
| B6_jason_reseq | -0.752 | -1.692 |
| MHCII_jason_reseq | -0.663 | -0.413 |
| Isoniazid02 | 0.102 | -0.41 |
| Rifampicin4 | -0.2 | -1.04 |
| Ethambutol3 | 0.392 | -0.906 |
| Meropenem3 | -0.497 | -0.46 |
| Vancomycin16 | -0.621 | -0.459 |
| Rv2680_day32 | 0.0 | 0.152 |
| H37Rv_KO_MarP | 1.161 | -0.47 |
| hypoxia_3wks | 0.821 | 0.0 |
| hypoxia_6wks | -0.791 | -0.883 |
| glycerol | 1.138 | 1.006 |
| cholesterol | 0.614 | 0.482 |
| AJ | -0.18 | -0.884 |
| Bibs02 | -0.642 | -1.123 |
| Bibs02c | -0.735 | 1.172 |
| BL6 | -0.201 | 0.506 |
| BL6a | -0.319 | 1.191 |
| BXD01 | -0.209 | 0.46 |
| BXD010 | 0.777 | 0.627 |
| BXD011 | -0.448 | 0.355 |
| BXD03 | 1.553 | 0.52 |
| BXD04 | 0.173 | 0.303 |
| BXD05 | 0.758 | -0.123 |
| BXD06 | -0.215 | 0.77 |
| BXD07 | 1.197 | 0.751 |
| BXD08 | 0.096 | 1.084 |
| BXD09 | 0.792 | 0.438 |
| CAST | -0.809 | -0.649 |
| CCcont | 0.393 | -0.044 |
| DS01 | 1.432 | 0.979 |
| DS02 | -0.548 | 0.942 |
| DS04 | -0.312 | -0.822 |
| DS0c | 0.57 | -0.064 |
| GP01 | -0.347 | -1.69 |
| GP02 | -0.292 | -0.955 |
| GP0c | -0.101 | -0.468 |
| NOD | -0.789 | -1.051 |
| NZO | 1.29 | -0.088 |
| PWK | -0.494 | 0.0 |
| H37Rv_KO_CtpC | -0.571 | 0.417 |
| H37Rv_KO_CtpD | -0.319 | 0.435 |
| H37Rv_KO_Rv1272 | -0.356 | 0.137 |
| H37Rv_KO_SugABC | -0.348 | -1.494 |
| H37Rv_KO_MbtN | -0.362 | 0.724 |
| Trans05 | -0.329 | -1.819 |
| macrophage_unactivated | 0.0 | 1.086 |
| IL1 | 0.0 | 0.368 |
| Rapamycin | 0.252 | -0.049 |
| Tcell | 0.0 | 0.688 |
| GMCSF | 0.618 | 1.043 |
| IFNab | 2.016 | 1.481 |
| IFNg | -0.233 | 0.639 |
| IFNg_GMCSF1 | -0.273 | 0.528 |
| Rv1432_day32 | 0.0 | -0.343 |
| Rv1565c_day32 | 0.0 | 0.294 |
| secA2_input | -0.412 | -0.574 |
| delta_Rv3594 | -0.742 | -0.075 |
| delta_Rv3717 | -0.135 | -0.927 |
| delta_Rv3811 | 0.149 | -1.017 |
| delta_Rv0954 | 0.842 | -0.063 |
| PonA1 | 1.031 | -0.466 |
| EccD1_KO | 1.924 | 0.618 |
| EspI_KO | 0.285 | 1.098 |
| PE35_KO | 0.0 | 0.0 |
| PPE68_KO | -0.71 | 0.544 |
| glycerol2 | 0.0 | -0.75 |
| lignocerate | 0.168 | -0.414 |
| oleate | 0.0 | 0.407 |
| phosphatidylcholine | 0.0 | 0.265 |
| acetate | 0.229 | 0.229 |
| glucAc | 0.392 | -0.666 |
| Rv0950ko | -0.971 | 0.175 |
| Rv1096ko | 0.546 | -0.229 |
| Rv3684ko | 1.117 | 0.144 |
| delta_otsA_trehalose | -0.133 | -0.881 |