Top 10 genes with highest correlation to Rv3832c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1465/- | (cc=0.5066) | info on Rv1465/- |
| Rv3078/hab | (cc=0.4861) | info on Rv3078/hab |
| Rv3439c/- | (cc=0.4823) | info on Rv3439c/- |
| Rv2159c/- | (cc=0.4586) | info on Rv2159c/- |
| Rv0841/- | (cc=0.4537) | info on Rv0841/- |
| Rv1727/- | (cc=0.4485) | info on Rv1727/- |
| Rv2285/- | (cc=0.4413) | info on Rv2285/- |
| Rv1228/lpqX | (cc=0.4291) | info on Rv1228/lpqX |
| Rv2015c/- | (cc=0.4289) | info on Rv2015c/- |
| Rv3651/- | (cc=0.4237) | info on Rv3651/- |
Correlation of Rv3832c/- with Rv3078/hab
Normalized LFCs for Rv3832c/-:
(description and provenance of datasets)
| Rv3832c/- | Rv3078/hab | |
| Fe_supp_jason_reseq | 0.128 | -2.251 |
| low_pH_jason_reseq | -0.621 | -0.842 |
| NO_jason_reseq | -0.181 | 0.336 |
| B6_jason_reseq | 0.25 | 0.061 |
| MHCII_jason_reseq | -0.493 | 0.791 |
| Isoniazid02 | -0.14 | 0.236 |
| Rifampicin4 | 0.087 | 0.038 |
| Ethambutol3 | 0.103 | -0.387 |
| Meropenem3 | 0.347 | -0.424 |
| Vancomycin16 | 0.398 | -0.528 |
| Rv2680_day32 | -0.452 | 0.393 |
| H37Rv_KO_MarP | 0.587 | -0.079 |
| hypoxia_3wks | -0.279 | -0.371 |
| hypoxia_6wks | -0.065 | -0.445 |
| glycerol | -0.255 | -0.193 |
| cholesterol | -0.341 | -0.505 |
| AJ | 0.062 | -0.103 |
| Bibs02 | 0.43 | 0.134 |
| Bibs02c | -0.781 | -0.944 |
| BL6 | -0.516 | -2.398 |
| BL6a | -0.301 | -1.758 |
| BXD01 | -0.621 | -2.412 |
| BXD010 | -1.004 | -0.772 |
| BXD011 | -0.78 | -2.897 |
| BXD03 | -1.77 | -1.217 |
| BXD04 | -0.9 | -3.003 |
| BXD05 | 0.07 | -2.153 |
| BXD06 | -0.406 | -1.919 |
| BXD07 | -0.987 | -1.651 |
| BXD08 | -0.968 | -3.23 |
| BXD09 | -0.399 | -2.602 |
| CAST | -0.108 | -0.304 |
| CCcont | -0.029 | -2.18 |
| DS01 | 0.157 | 0.183 |
| DS02 | 0.66 | -0.725 |
| DS04 | -1.148 | -1.698 |
| DS0c | 1.108 | 0.682 |
| GP01 | 0.18 | -1.441 |
| GP02 | 1.32 | -1.418 |
| GP0c | 0.676 | -2.251 |
| NOD | -0.661 | -0.255 |
| NZO | 0.577 | -0.191 |
| PWK | 0.584 | 0.202 |
| H37Rv_KO_CtpC | -0.056 | -0.773 |
| H37Rv_KO_CtpD | 1.355 | 1.488 |
| H37Rv_KO_Rv1272 | -0.016 | -3.875 |
| H37Rv_KO_SugABC | -0.338 | -0.636 |
| H37Rv_KO_MbtN | 0.043 | -0.815 |
| Trans05 | -0.561 | -3.919 |
| macrophage_unactivated | 0.256 | -2.396 |
| IL1 | 0.145 | -2.477 |
| Rapamycin | 0.439 | -1.697 |
| Tcell | -0.137 | -1.401 |
| GMCSF | 0.702 | 0.734 |
| IFNab | -0.369 | -0.877 |
| IFNg | -1.013 | 0.171 |
| IFNg_GMCSF1 | 0.305 | 0.456 |
| Rv1432_day32 | 0.192 | -0.372 |
| Rv1565c_day32 | 0.194 | 0.929 |
| secA2_input | 0.894 | 2.908 |
| delta_Rv3594 | 0.525 | 2.473 |
| delta_Rv3717 | 0.898 | 1.64 |
| delta_Rv3811 | 0.561 | 2.131 |
| delta_Rv0954 | 2.296 | 1.897 |
| PonA1 | 0.641 | 1.866 |
| EccD1_KO | 1.371 | 1.02 |
| EspI_KO | 0.915 | 2.133 |
| PE35_KO | 0.578 | 1.762 |
| PPE68_KO | 0.381 | 2.662 |
| glycerol2 | 0.196 | -1.24 |
| lignocerate | 0.526 | -1.371 |
| oleate | -0.552 | -0.478 |
| phosphatidylcholine | 0.331 | -0.737 |
| acetate | -0.175 | 1.807 |
| glucAc | 0.348 | -0.734 |
| Rv0950ko | -0.413 | -0.262 |
| Rv1096ko | 0.0 | 0.663 |
| Rv3684ko | -0.115 | -0.229 |
| delta_otsA_trehalose | -0.476 | 0.711 |