Top 10 genes with highest correlation to Rv3832c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1465/- | (cc=0.5066) | info on Rv1465/- |
| Rv3078/hab | (cc=0.4861) | info on Rv3078/hab |
| Rv3439c/- | (cc=0.4823) | info on Rv3439c/- |
| Rv2159c/- | (cc=0.4586) | info on Rv2159c/- |
| Rv0841/- | (cc=0.4537) | info on Rv0841/- |
| Rv1727/- | (cc=0.4485) | info on Rv1727/- |
| Rv2285/- | (cc=0.4413) | info on Rv2285/- |
| Rv1228/lpqX | (cc=0.4291) | info on Rv1228/lpqX |
| Rv2015c/- | (cc=0.4289) | info on Rv2015c/- |
| Rv3651/- | (cc=0.4237) | info on Rv3651/- |
Correlation of Rv3832c/- with Rv1228/lpqX
Normalized LFCs for Rv3832c/-:
(description and provenance of datasets)
| Rv3832c/- | Rv1228/lpqX | |
| Fe_supp_jason_reseq | 0.128 | -0.538 |
| low_pH_jason_reseq | -0.621 | -0.708 |
| NO_jason_reseq | -0.181 | -0.113 |
| B6_jason_reseq | 0.25 | 0.293 |
| MHCII_jason_reseq | -0.493 | -0.4 |
| Isoniazid02 | -0.14 | 0.8 |
| Rifampicin4 | 0.087 | -0.008 |
| Ethambutol3 | 0.103 | 1.6 |
| Meropenem3 | 0.347 | 0.714 |
| Vancomycin16 | 0.398 | -0.265 |
| Rv2680_day32 | -0.452 | -0.468 |
| H37Rv_KO_MarP | 0.587 | 0.251 |
| hypoxia_3wks | -0.279 | -0.06 |
| hypoxia_6wks | -0.065 | 0.192 |
| glycerol | -0.255 | 0.477 |
| cholesterol | -0.341 | -0.366 |
| AJ | 0.062 | 0.106 |
| Bibs02 | 0.43 | 0.301 |
| Bibs02c | -0.781 | -0.573 |
| BL6 | -0.516 | -0.277 |
| BL6a | -0.301 | -0.342 |
| BXD01 | -0.621 | -0.593 |
| BXD010 | -1.004 | -0.297 |
| BXD011 | -0.78 | -0.278 |
| BXD03 | -1.77 | -0.506 |
| BXD04 | -0.9 | -0.42 |
| BXD05 | 0.07 | -0.16 |
| BXD06 | -0.406 | -0.505 |
| BXD07 | -0.987 | 0.154 |
| BXD08 | -0.968 | -0.562 |
| BXD09 | -0.399 | -0.12 |
| CAST | -0.108 | -0.534 |
| CCcont | -0.029 | -0.306 |
| DS01 | 0.157 | -0.621 |
| DS02 | 0.66 | -0.381 |
| DS04 | -1.148 | 0.226 |
| DS0c | 1.108 | -0.198 |
| GP01 | 0.18 | 0.303 |
| GP02 | 1.32 | 0.887 |
| GP0c | 0.676 | -0.073 |
| NOD | -0.661 | -0.018 |
| NZO | 0.577 | 0.462 |
| PWK | 0.584 | 0.037 |
| H37Rv_KO_CtpC | -0.056 | -1.065 |
| H37Rv_KO_CtpD | 1.355 | -1.041 |
| H37Rv_KO_Rv1272 | -0.016 | 0.022 |
| H37Rv_KO_SugABC | -0.338 | 1.225 |
| H37Rv_KO_MbtN | 0.043 | -0.556 |
| Trans05 | -0.561 | 0.056 |
| macrophage_unactivated | 0.256 | -0.237 |
| IL1 | 0.145 | 0.169 |
| Rapamycin | 0.439 | -0.025 |
| Tcell | -0.137 | -0.283 |
| GMCSF | 0.702 | -0.032 |
| IFNab | -0.369 | -0.166 |
| IFNg | -1.013 | -0.233 |
| IFNg_GMCSF1 | 0.305 | -0.198 |
| Rv1432_day32 | 0.192 | 0.511 |
| Rv1565c_day32 | 0.194 | 0.161 |
| secA2_input | 0.894 | -0.066 |
| delta_Rv3594 | 0.525 | 0.597 |
| delta_Rv3717 | 0.898 | 0.934 |
| delta_Rv3811 | 0.561 | 0.635 |
| delta_Rv0954 | 2.296 | 1.355 |
| PonA1 | 0.641 | 0.833 |
| EccD1_KO | 1.371 | 0.793 |
| EspI_KO | 0.915 | 0.117 |
| PE35_KO | 0.578 | 0.79 |
| PPE68_KO | 0.381 | 0.186 |
| glycerol2 | 0.196 | 0.179 |
| lignocerate | 0.526 | 0.934 |
| oleate | -0.552 | 0.204 |
| phosphatidylcholine | 0.331 | 0.608 |
| acetate | -0.175 | 0.342 |
| glucAc | 0.348 | 0.435 |
| Rv0950ko | -0.413 | -0.639 |
| Rv1096ko | 0.0 | -0.935 |
| Rv3684ko | -0.115 | -0.662 |
| delta_otsA_trehalose | -0.476 | -0.722 |