Top 10 genes with highest correlation to Rv3829c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3108/- | (cc=0.5668) | info on Rv3108/- |
| Rv1946c/lppG | (cc=0.545) | info on Rv1946c/lppG |
| Rv3398c/idsA1 | (cc=0.5255) | info on Rv3398c/idsA1 |
| Rv0844c/narL | (cc=0.5092) | info on Rv0844c/narL |
| Rv2452c/- | (cc=0.5074) | info on Rv2452c/- |
| Rv2807/- | (cc=0.4958) | info on Rv2807/- |
| Rv2428/ahpC | (cc=0.4923) | info on Rv2428/ahpC |
| Rv2070c/cobK | (cc=0.4855) | info on Rv2070c/cobK |
| Rv3166c/- | (cc=0.4773) | info on Rv3166c/- |
| Rv1962A/vapB35 | (cc=0.4712) | info on Rv1962A/vapB35 |
Correlation of Rv3829c/- with Rv1946c/lppG
Normalized LFCs for Rv3829c/-:
(description and provenance of datasets)
| Rv3829c/- | Rv1946c/lppG | |
| Fe_supp_jason_reseq | -0.511 | -1.197 |
| low_pH_jason_reseq | 0.555 | -0.289 |
| NO_jason_reseq | -0.27 | -0.454 |
| B6_jason_reseq | -1.185 | -0.938 |
| MHCII_jason_reseq | -0.647 | -1.04 |
| Isoniazid02 | -0.31 | -0.313 |
| Rifampicin4 | -0.523 | -0.162 |
| Ethambutol3 | -0.102 | -0.058 |
| Meropenem3 | 0.125 | 0.248 |
| Vancomycin16 | -0.072 | -0.225 |
| Rv2680_day32 | 0.917 | -0.103 |
| H37Rv_KO_MarP | 0.27 | -0.525 |
| hypoxia_3wks | -0.419 | -0.941 |
| hypoxia_6wks | -0.737 | 0.374 |
| glycerol | 0.336 | 1.135 |
| cholesterol | -0.012 | -0.315 |
| AJ | 0.113 | -0.092 |
| Bibs02 | -0.907 | -0.427 |
| Bibs02c | -0.161 | -0.112 |
| BL6 | 0.639 | 0.063 |
| BL6a | 0.288 | 0.198 |
| BXD01 | 0.542 | 0.304 |
| BXD010 | 0.608 | 0.68 |
| BXD011 | 0.34 | -0.428 |
| BXD03 | 0.378 | 0.384 |
| BXD04 | 0.534 | -0.154 |
| BXD05 | -0.033 | -0.661 |
| BXD06 | 0.398 | 0.895 |
| BXD07 | 0.361 | -0.018 |
| BXD08 | 0.725 | -0.268 |
| BXD09 | 0.225 | 0.268 |
| CAST | -0.39 | -0.322 |
| CCcont | 0.446 | -0.143 |
| DS01 | -0.332 | 0.346 |
| DS02 | 0.254 | -0.473 |
| DS04 | -0.547 | -0.214 |
| DS0c | 0.071 | -0.303 |
| GP01 | 0.313 | -1.121 |
| GP02 | 0.762 | -0.67 |
| GP0c | -0.438 | 0.289 |
| NOD | 0.643 | -0.838 |
| NZO | -0.189 | -0.897 |
| PWK | -0.729 | -0.769 |
| H37Rv_KO_CtpC | 0.282 | 0.901 |
| H37Rv_KO_CtpD | 1.268 | 0.095 |
| H37Rv_KO_Rv1272 | 0.713 | 0.089 |
| H37Rv_KO_SugABC | 0.807 | 1.828 |
| H37Rv_KO_MbtN | 0.201 | -0.694 |
| Trans05 | 0.255 | -0.125 |
| macrophage_unactivated | 0.47 | -0.24 |
| IL1 | 0.605 | 0.0 |
| Rapamycin | 0.218 | -0.528 |
| Tcell | 0.362 | -0.613 |
| GMCSF | 1.117 | -0.24 |
| IFNab | 0.726 | 1.267 |
| IFNg | 0.593 | 0.446 |
| IFNg_GMCSF1 | 0.097 | 0.644 |
| Rv1432_day32 | 0.387 | -0.184 |
| Rv1565c_day32 | 0.441 | 0.0 |
| secA2_input | 0.313 | -0.424 |
| delta_Rv3594 | -0.381 | -0.301 |
| delta_Rv3717 | -0.58 | -0.374 |
| delta_Rv3811 | 0.22 | 0.697 |
| delta_Rv0954 | 0.013 | -0.305 |
| PonA1 | 0.149 | -1.929 |
| EccD1_KO | 1.207 | 1.723 |
| EspI_KO | 1.149 | 0.907 |
| PE35_KO | 1.254 | 2.975 |
| PPE68_KO | 1.318 | 2.972 |
| glycerol2 | -0.441 | -0.82 |
| lignocerate | -0.106 | -1.148 |
| oleate | -0.225 | -0.71 |
| phosphatidylcholine | -0.409 | -0.86 |
| acetate | -0.447 | -0.788 |
| glucAc | -0.338 | -1.014 |
| Rv0950ko | -0.347 | 0.44 |
| Rv1096ko | 0.205 | -0.636 |
| Rv3684ko | -0.236 | -0.481 |
| delta_otsA_trehalose | -0.033 | -0.535 |