Top 10 genes with highest correlation to Rv3825c/pks2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3820c/papA2 | (cc=0.7076) | info on Rv3820c/papA2 |
| Rv3824c/papA1 | (cc=0.6858) | info on Rv3824c/papA1 |
| Rv0389/purT | (cc=0.5402) | info on Rv0389/purT |
| Rv0356c/- | (cc=0.5277) | info on Rv0356c/- |
| Rv2867c/- | (cc=0.5151) | info on Rv2867c/- |
| Rv2323c/- | (cc=0.4963) | info on Rv2323c/- |
| Rv1765c/- | (cc=0.4857) | info on Rv1765c/- |
| Rv2559c/- | (cc=0.4835) | info on Rv2559c/- |
| Rv2506/- | (cc=0.4742) | info on Rv2506/- |
| Rv2105/- | (cc=0.4609) | info on Rv2105/- |
Correlation of Rv3825c/pks2 with Rv2867c/-
Normalized LFCs for Rv3825c/pks2:
(description and provenance of datasets)
| Rv3825c/pks2 | Rv2867c/- | |
| Fe_supp_jason_reseq | -0.827 | -0.286 |
| low_pH_jason_reseq | 0.065 | 1.094 |
| NO_jason_reseq | 0.228 | 2.919 |
| B6_jason_reseq | 0.412 | -0.311 |
| MHCII_jason_reseq | 0.181 | 1.83 |
| Isoniazid02 | -0.236 | -0.188 |
| Rifampicin4 | 0.125 | 0.712 |
| Ethambutol3 | 1.422 | -0.371 |
| Meropenem3 | 0.582 | 4.582 |
| Vancomycin16 | 0.525 | 0.759 |
| Rv2680_day32 | -0.413 | -0.52 |
| H37Rv_KO_MarP | 0.226 | 0.44 |
| hypoxia_3wks | -0.578 | -0.219 |
| hypoxia_6wks | -0.025 | -0.299 |
| glycerol | 0.094 | 1.701 |
| cholesterol | -1.454 | 1.109 |
| AJ | 0.321 | 1.257 |
| Bibs02 | -0.56 | 0.093 |
| Bibs02c | -0.67 | 0.47 |
| BL6 | -0.087 | -0.543 |
| BL6a | -0.651 | -0.218 |
| BXD01 | -0.862 | -0.629 |
| BXD010 | -0.185 | -0.265 |
| BXD011 | -0.448 | -0.533 |
| BXD03 | -0.503 | -0.058 |
| BXD04 | -0.064 | 0.48 |
| BXD05 | -0.263 | -0.975 |
| BXD06 | -0.421 | -0.086 |
| BXD07 | -0.487 | -0.646 |
| BXD08 | -0.395 | 0.582 |
| BXD09 | -0.853 | -0.852 |
| CAST | 0.701 | 2.399 |
| CCcont | -0.392 | 0.231 |
| DS01 | -0.441 | 2.024 |
| DS02 | -0.321 | 1.482 |
| DS04 | -0.711 | 1.258 |
| DS0c | -0.815 | 1.419 |
| GP01 | -0.686 | -0.895 |
| GP02 | -0.023 | 0.034 |
| GP0c | -0.713 | -1.506 |
| NOD | 0.638 | 1.494 |
| NZO | 0.198 | 1.595 |
| PWK | 0.816 | 2.066 |
| H37Rv_KO_CtpC | -0.344 | -0.758 |
| H37Rv_KO_CtpD | 0.683 | 0.327 |
| H37Rv_KO_Rv1272 | -0.711 | -0.59 |
| H37Rv_KO_SugABC | -0.701 | 1.088 |
| H37Rv_KO_MbtN | -0.65 | -0.125 |
| Trans05 | -0.382 | -0.322 |
| macrophage_unactivated | -0.985 | -1.36 |
| IL1 | -0.635 | 0.323 |
| Rapamycin | -1.025 | -0.473 |
| Tcell | -1.489 | -2.014 |
| GMCSF | -0.842 | -1.439 |
| IFNab | -1.076 | -2.694 |
| IFNg | -1.032 | -1.521 |
| IFNg_GMCSF1 | -0.98 | -0.716 |
| Rv1432_day32 | 0.4 | 1.886 |
| Rv1565c_day32 | -0.363 | 0.67 |
| secA2_input | 0.086 | -0.78 |
| delta_Rv3594 | -0.566 | -0.685 |
| delta_Rv3717 | -0.978 | -1.854 |
| delta_Rv3811 | -0.302 | -0.254 |
| delta_Rv0954 | -0.186 | -1.257 |
| PonA1 | -0.398 | -1.045 |
| EccD1_KO | -0.796 | 0.464 |
| EspI_KO | -0.85 | -0.667 |
| PE35_KO | 0.093 | 0.621 |
| PPE68_KO | -0.394 | -0.045 |
| glycerol2 | -0.362 | -2.123 |
| lignocerate | 0.505 | -0.627 |
| oleate | -0.424 | -0.414 |
| phosphatidylcholine | -1.79 | -2.323 |
| acetate | -0.198 | 1.077 |
| glucAc | -0.151 | 1.944 |
| Rv0950ko | 0.205 | 0.519 |
| Rv1096ko | -0.44 | -0.283 |
| Rv3684ko | -0.314 | -0.308 |
| delta_otsA_trehalose | 0.627 | -0.74 |