Top 10 genes with highest correlation to Rv3825c/pks2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3820c/papA2 | (cc=0.7076) | info on Rv3820c/papA2 |
| Rv3824c/papA1 | (cc=0.6858) | info on Rv3824c/papA1 |
| Rv0389/purT | (cc=0.5402) | info on Rv0389/purT |
| Rv0356c/- | (cc=0.5277) | info on Rv0356c/- |
| Rv2867c/- | (cc=0.5151) | info on Rv2867c/- |
| Rv2323c/- | (cc=0.4963) | info on Rv2323c/- |
| Rv1765c/- | (cc=0.4857) | info on Rv1765c/- |
| Rv2559c/- | (cc=0.4835) | info on Rv2559c/- |
| Rv2506/- | (cc=0.4742) | info on Rv2506/- |
| Rv2105/- | (cc=0.4609) | info on Rv2105/- |
Correlation of Rv3825c/pks2 with Rv0389/purT
Normalized LFCs for Rv3825c/pks2:
(description and provenance of datasets)
| Rv3825c/pks2 | Rv0389/purT | |
| Fe_supp_jason_reseq | -0.827 | -0.033 |
| low_pH_jason_reseq | 0.065 | 0.102 |
| NO_jason_reseq | 0.228 | 0.365 |
| B6_jason_reseq | 0.412 | 1.211 |
| MHCII_jason_reseq | 0.181 | -0.44 |
| Isoniazid02 | -0.236 | 1.011 |
| Rifampicin4 | 0.125 | 0.615 |
| Ethambutol3 | 1.422 | 1.234 |
| Meropenem3 | 0.582 | 0.876 |
| Vancomycin16 | 0.525 | 0.623 |
| Rv2680_day32 | -0.413 | 0.659 |
| H37Rv_KO_MarP | 0.226 | 0.579 |
| hypoxia_3wks | -0.578 | -0.706 |
| hypoxia_6wks | -0.025 | -0.299 |
| glycerol | 0.094 | -0.41 |
| cholesterol | -1.454 | -1.578 |
| AJ | 0.321 | 0.691 |
| Bibs02 | -0.56 | -0.074 |
| Bibs02c | -0.67 | -0.875 |
| BL6 | -0.087 | -0.236 |
| BL6a | -0.651 | -0.804 |
| BXD01 | -0.862 | -0.425 |
| BXD010 | -0.185 | 0.43 |
| BXD011 | -0.448 | -0.694 |
| BXD03 | -0.503 | -0.32 |
| BXD04 | -0.064 | -0.562 |
| BXD05 | -0.263 | -0.77 |
| BXD06 | -0.421 | 0.011 |
| BXD07 | -0.487 | -1.237 |
| BXD08 | -0.395 | -0.412 |
| BXD09 | -0.853 | -0.105 |
| CAST | 0.701 | 0.045 |
| CCcont | -0.392 | -1.075 |
| DS01 | -0.441 | 0.277 |
| DS02 | -0.321 | 0.942 |
| DS04 | -0.711 | -0.655 |
| DS0c | -0.815 | 0.91 |
| GP01 | -0.686 | 0.737 |
| GP02 | -0.023 | 0.089 |
| GP0c | -0.713 | -0.808 |
| NOD | 0.638 | -0.018 |
| NZO | 0.198 | 0.464 |
| PWK | 0.816 | 0.881 |
| H37Rv_KO_CtpC | -0.344 | -0.65 |
| H37Rv_KO_CtpD | 0.683 | 0.112 |
| H37Rv_KO_Rv1272 | -0.711 | -0.749 |
| H37Rv_KO_SugABC | -0.701 | -0.713 |
| H37Rv_KO_MbtN | -0.65 | -0.244 |
| Trans05 | -0.382 | 0.295 |
| macrophage_unactivated | -0.985 | -1.401 |
| IL1 | -0.635 | -0.175 |
| Rapamycin | -1.025 | -1.795 |
| Tcell | -1.489 | -0.847 |
| GMCSF | -0.842 | -1.215 |
| IFNab | -1.076 | -0.559 |
| IFNg | -1.032 | -0.307 |
| IFNg_GMCSF1 | -0.98 | -1.273 |
| Rv1432_day32 | 0.4 | -0.091 |
| Rv1565c_day32 | -0.363 | -0.291 |
| secA2_input | 0.086 | 0.737 |
| delta_Rv3594 | -0.566 | -0.021 |
| delta_Rv3717 | -0.978 | -0.428 |
| delta_Rv3811 | -0.302 | -0.532 |
| delta_Rv0954 | -0.186 | -0.416 |
| PonA1 | -0.398 | 0.12 |
| EccD1_KO | -0.796 | -0.039 |
| EspI_KO | -0.85 | 0.545 |
| PE35_KO | 0.093 | -1.14 |
| PPE68_KO | -0.394 | -1.302 |
| glycerol2 | -0.362 | -0.527 |
| lignocerate | 0.505 | -0.669 |
| oleate | -0.424 | -0.415 |
| phosphatidylcholine | -1.79 | -0.679 |
| acetate | -0.198 | -0.341 |
| glucAc | -0.151 | -0.623 |
| Rv0950ko | 0.205 | 0.235 |
| Rv1096ko | -0.44 | 0.932 |
| Rv3684ko | -0.314 | -0.029 |
| delta_otsA_trehalose | 0.627 | 1.126 |