Top 10 genes with highest correlation to Rv3824c/papA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3820c/papA2 | (cc=0.6907) | info on Rv3820c/papA2 |
| Rv3825c/pks2 | (cc=0.6858) | info on Rv3825c/pks2 |
| Rv3826/fadD23 | (cc=0.5764) | info on Rv3826/fadD23 |
| Rv0356c/- | (cc=0.5479) | info on Rv0356c/- |
| Rv2709/- | (cc=0.5137) | info on Rv2709/- |
| Rv3018c/PPE46 | (cc=0.4955) | info on Rv3018c/PPE46 |
| Rv0643c/mmaA3 | (cc=0.4829) | info on Rv0643c/mmaA3 |
| Rv1239c/corA | (cc=0.474) | info on Rv1239c/corA |
| Rv3380c/- | (cc=0.4708) | info on Rv3380c/- |
| Rv3419c/gcp | (cc=0.465) | info on Rv3419c/gcp |
Correlation of Rv3824c/papA1 with Rv3419c/gcp
Normalized LFCs for Rv3824c/papA1:
(description and provenance of datasets)
| Rv3824c/papA1 | Rv3419c/gcp | |
| Fe_supp_jason_reseq | -0.123 | -1.455 |
| low_pH_jason_reseq | 0.77 | 0.353 |
| NO_jason_reseq | 0.885 | 3.179 |
| B6_jason_reseq | 0.685 | 0.578 |
| MHCII_jason_reseq | 0.637 | -1.332 |
| Isoniazid02 | -0.688 | -1.685 |
| Rifampicin4 | 0.609 | 0.845 |
| Ethambutol3 | 1.183 | 1.389 |
| Meropenem3 | -0.202 | 0.0 |
| Vancomycin16 | 0.74 | 0.13 |
| Rv2680_day32 | -0.197 | -0.811 |
| H37Rv_KO_MarP | 0.442 | -0.44 |
| hypoxia_3wks | -0.925 | 0.0 |
| hypoxia_6wks | -0.125 | 0.0 |
| glycerol | 1.135 | -0.083 |
| cholesterol | -0.541 | -1.447 |
| AJ | 0.513 | 1.536 |
| Bibs02 | -0.077 | -0.703 |
| Bibs02c | -0.149 | -0.467 |
| BL6 | 0.919 | 2.916 |
| BL6a | 0.438 | 1.474 |
| BXD01 | -0.254 | 2.919 |
| BXD010 | 0.093 | 2.677 |
| BXD011 | 0.216 | 3.476 |
| BXD03 | 0.407 | 3.152 |
| BXD04 | 0.128 | 3.199 |
| BXD05 | 0.363 | 2.698 |
| BXD06 | 0.265 | 3.834 |
| BXD07 | 0.143 | 2.848 |
| BXD08 | 0.279 | 3.06 |
| BXD09 | -0.11 | 2.295 |
| CAST | 0.971 | 2.279 |
| CCcont | 0.338 | 2.265 |
| DS01 | 0.171 | -0.775 |
| DS02 | -0.285 | -0.181 |
| DS04 | -0.122 | 0.873 |
| DS0c | -0.423 | -0.278 |
| GP01 | 0.481 | -0.888 |
| GP02 | -0.017 | -0.831 |
| GP0c | 0.127 | 0.775 |
| NOD | 0.329 | 1.01 |
| NZO | 0.61 | 1.777 |
| PWK | 1.421 | 3.711 |
| H37Rv_KO_CtpC | 0.625 | 1.272 |
| H37Rv_KO_CtpD | 1.703 | 2.089 |
| H37Rv_KO_Rv1272 | 0.632 | 0.993 |
| H37Rv_KO_SugABC | 0.033 | 1.521 |
| H37Rv_KO_MbtN | 0.439 | 1.977 |
| Trans05 | 0.508 | 1.517 |
| macrophage_unactivated | -1.408 | -1.045 |
| IL1 | -0.599 | -0.715 |
| Rapamycin | -1.31 | -1.795 |
| Tcell | -1.421 | 0.349 |
| GMCSF | 0.161 | -1.127 |
| IFNab | -0.937 | 0.813 |
| IFNg | -0.412 | -1.141 |
| IFNg_GMCSF1 | -1.37 | -1.191 |
| Rv1432_day32 | -0.368 | -0.395 |
| Rv1565c_day32 | -1.234 | -0.262 |
| secA2_input | -0.124 | -0.163 |
| delta_Rv3594 | -0.128 | 0.598 |
| delta_Rv3717 | -0.581 | 0.992 |
| delta_Rv3811 | 0.291 | 0.949 |
| delta_Rv0954 | 0.452 | -0.774 |
| PonA1 | 0.476 | 0.121 |
| EccD1_KO | -0.714 | 0.368 |
| EspI_KO | -0.676 | -1.229 |
| PE35_KO | 0.248 | -0.353 |
| PPE68_KO | -0.083 | -0.307 |
| glycerol2 | -0.118 | -1.808 |
| lignocerate | 0.682 | -1.93 |
| oleate | -0.637 | -1.829 |
| phosphatidylcholine | -1.448 | -2.043 |
| acetate | 0.276 | -1.453 |
| glucAc | 0.239 | 1.045 |
| Rv0950ko | -0.06 | 0.419 |
| Rv1096ko | -1.152 | -0.259 |
| Rv3684ko | -0.914 | 1.15 |
| delta_otsA_trehalose | 0.442 | 0.965 |