Top 10 genes with highest correlation to Rv3824c/papA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3820c/papA2 | (cc=0.6907) | info on Rv3820c/papA2 |
| Rv3825c/pks2 | (cc=0.6858) | info on Rv3825c/pks2 |
| Rv3826/fadD23 | (cc=0.5764) | info on Rv3826/fadD23 |
| Rv0356c/- | (cc=0.5479) | info on Rv0356c/- |
| Rv2709/- | (cc=0.5137) | info on Rv2709/- |
| Rv3018c/PPE46 | (cc=0.4955) | info on Rv3018c/PPE46 |
| Rv0643c/mmaA3 | (cc=0.4829) | info on Rv0643c/mmaA3 |
| Rv1239c/corA | (cc=0.474) | info on Rv1239c/corA |
| Rv3380c/- | (cc=0.4708) | info on Rv3380c/- |
| Rv3419c/gcp | (cc=0.465) | info on Rv3419c/gcp |
Correlation of Rv3824c/papA1 with Rv0356c/-
Normalized LFCs for Rv3824c/papA1:
(description and provenance of datasets)
| Rv3824c/papA1 | Rv0356c/- | |
| Fe_supp_jason_reseq | -0.123 | 0.851 |
| low_pH_jason_reseq | 0.77 | -0.323 |
| NO_jason_reseq | 0.885 | 0.228 |
| B6_jason_reseq | 0.685 | 1.276 |
| MHCII_jason_reseq | 0.637 | 1.932 |
| Isoniazid02 | -0.688 | -0.992 |
| Rifampicin4 | 0.609 | 0.428 |
| Ethambutol3 | 1.183 | 2.255 |
| Meropenem3 | -0.202 | -0.012 |
| Vancomycin16 | 0.74 | -0.199 |
| Rv2680_day32 | -0.197 | -1.263 |
| H37Rv_KO_MarP | 0.442 | 1.075 |
| hypoxia_3wks | -0.925 | -0.905 |
| hypoxia_6wks | -0.125 | -0.812 |
| glycerol | 1.135 | 1.113 |
| cholesterol | -0.541 | -0.369 |
| AJ | 0.513 | 0.906 |
| Bibs02 | -0.077 | 0.256 |
| Bibs02c | -0.149 | -0.133 |
| BL6 | 0.919 | -0.311 |
| BL6a | 0.438 | -0.442 |
| BXD01 | -0.254 | -0.487 |
| BXD010 | 0.093 | -0.738 |
| BXD011 | 0.216 | -0.563 |
| BXD03 | 0.407 | -1.073 |
| BXD04 | 0.128 | -0.065 |
| BXD05 | 0.363 | -0.454 |
| BXD06 | 0.265 | -0.59 |
| BXD07 | 0.143 | -0.58 |
| BXD08 | 0.279 | -1.1 |
| BXD09 | -0.11 | -1.099 |
| CAST | 0.971 | 0.834 |
| CCcont | 0.338 | -0.782 |
| DS01 | 0.171 | 0.794 |
| DS02 | -0.285 | 0.723 |
| DS04 | -0.122 | 0.107 |
| DS0c | -0.423 | -0.198 |
| GP01 | 0.481 | 0.614 |
| GP02 | -0.017 | 0.153 |
| GP0c | 0.127 | -0.273 |
| NOD | 0.329 | 0.805 |
| NZO | 0.61 | 0.475 |
| PWK | 1.421 | 0.368 |
| H37Rv_KO_CtpC | 0.625 | -0.892 |
| H37Rv_KO_CtpD | 1.703 | 0.296 |
| H37Rv_KO_Rv1272 | 0.632 | -0.436 |
| H37Rv_KO_SugABC | 0.033 | -0.692 |
| H37Rv_KO_MbtN | 0.439 | -0.731 |
| Trans05 | 0.508 | -0.351 |
| macrophage_unactivated | -1.408 | -1.203 |
| IL1 | -0.599 | -0.97 |
| Rapamycin | -1.31 | -1.608 |
| Tcell | -1.421 | -1.284 |
| GMCSF | 0.161 | -0.026 |
| IFNab | -0.937 | -1.318 |
| IFNg | -0.412 | -0.874 |
| IFNg_GMCSF1 | -1.37 | -0.905 |
| Rv1432_day32 | -0.368 | -0.172 |
| Rv1565c_day32 | -1.234 | -1.369 |
| secA2_input | -0.124 | -0.988 |
| delta_Rv3594 | -0.128 | 0.021 |
| delta_Rv3717 | -0.581 | 0.034 |
| delta_Rv3811 | 0.291 | 0.232 |
| delta_Rv0954 | 0.452 | 0.137 |
| PonA1 | 0.476 | 1.064 |
| EccD1_KO | -0.714 | 0.881 |
| EspI_KO | -0.676 | -0.248 |
| PE35_KO | 0.248 | 0.298 |
| PPE68_KO | -0.083 | 0.717 |
| glycerol2 | -0.118 | -0.024 |
| lignocerate | 0.682 | -0.153 |
| oleate | -0.637 | -0.448 |
| phosphatidylcholine | -1.448 | -0.228 |
| acetate | 0.276 | 0.231 |
| glucAc | 0.239 | -0.168 |
| Rv0950ko | -0.06 | -0.148 |
| Rv1096ko | -1.152 | -0.76 |
| Rv3684ko | -0.914 | -1.464 |
| delta_otsA_trehalose | 0.442 | 1.351 |