Top 10 genes with highest correlation to Rv3807c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0541c/- | (cc=0.5901) | info on Rv0541c/- |
| Rv1512/epiA | (cc=0.5811) | info on Rv1512/epiA |
| Rv0998/- | (cc=0.555) | info on Rv0998/- |
| Rv1421/- | (cc=0.5326) | info on Rv1421/- |
| Rv0092/ctpA | (cc=0.5248) | info on Rv0092/ctpA |
| Rv3918c/parA | (cc=0.4916) | info on Rv3918c/parA |
| Rv0545c/pitA | (cc=0.4876) | info on Rv0545c/pitA |
| Rv2036/- | (cc=0.4866) | info on Rv2036/- |
| Rv1080c/greA | (cc=0.4743) | info on Rv1080c/greA |
| Rv2246/kasB | (cc=0.4734) | info on Rv2246/kasB |
Correlation of Rv3807c/- with Rv3918c/parA
Normalized LFCs for Rv3807c/-:
(description and provenance of datasets)
| Rv3807c/- | Rv3918c/parA | |
| Fe_supp_jason_reseq | 3.017 | 0.182 |
| low_pH_jason_reseq | -1.79 | -0.211 |
| NO_jason_reseq | 0.176 | 0.302 |
| B6_jason_reseq | 1.071 | -0.292 |
| MHCII_jason_reseq | 0.977 | -0.257 |
| Isoniazid02 | 0.642 | 0.407 |
| Rifampicin4 | -0.29 | -0.29 |
| Ethambutol3 | 0.711 | 0.0 |
| Meropenem3 | -0.128 | 0.858 |
| Vancomycin16 | -0.589 | 0.0 |
| Rv2680_day32 | 1.294 | 0.101 |
| H37Rv_KO_MarP | -1.699 | -0.454 |
| hypoxia_3wks | 2.265 | 0.327 |
| hypoxia_6wks | 1.391 | -1.05 |
| glycerol | -1.729 | -0.353 |
| cholesterol | -1.715 | -0.398 |
| AJ | -2.284 | 0.504 |
| Bibs02 | 2.215 | 0.397 |
| Bibs02c | -0.318 | 0.162 |
| BL6 | -1.706 | -0.343 |
| BL6a | -0.222 | -0.544 |
| BXD01 | -1.694 | 0.194 |
| BXD010 | 0.229 | -0.224 |
| BXD011 | -2.236 | -0.35 |
| BXD03 | -1.678 | -0.371 |
| BXD04 | -1.335 | -0.34 |
| BXD05 | 0.374 | -0.369 |
| BXD06 | -1.509 | -0.366 |
| BXD07 | -0.36 | -0.242 |
| BXD08 | -1.999 | -0.365 |
| BXD09 | -0.365 | -0.386 |
| CAST | -2.486 | -0.402 |
| CCcont | -1.279 | 0.957 |
| DS01 | -0.265 | -0.197 |
| DS02 | 0.663 | -0.597 |
| DS04 | -0.461 | -0.533 |
| DS0c | 1.263 | 0.608 |
| GP01 | 2.895 | -0.271 |
| GP02 | 0.889 | -0.228 |
| GP0c | 1.86 | -0.357 |
| NOD | -2.211 | -0.617 |
| NZO | -1.211 | -0.348 |
| PWK | -2.676 | -0.163 |
| H37Rv_KO_CtpC | -1.837 | 0.0 |
| H37Rv_KO_CtpD | -1.728 | 0.43 |
| H37Rv_KO_Rv1272 | -0.466 | -0.117 |
| H37Rv_KO_SugABC | -1.649 | -0.272 |
| H37Rv_KO_MbtN | 0.931 | -0.086 |
| Trans05 | 0.327 | -0.359 |
| macrophage_unactivated | -0.855 | 0.436 |
| IL1 | -2.394 | 0.0 |
| Rapamycin | -1.488 | 0.0 |
| Tcell | -1.219 | 0.0 |
| GMCSF | -1.133 | 0.0 |
| IFNab | 2.833 | 0.0 |
| IFNg | 0.609 | 0.0 |
| IFNg_GMCSF1 | -3.274 | 0.0 |
| Rv1432_day32 | -0.819 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.847 |
| secA2_input | -1.061 | 0.482 |
| delta_Rv3594 | 3.295 | 2.094 |
| delta_Rv3717 | 3.809 | 0.834 |
| delta_Rv3811 | 5.154 | 2.296 |
| delta_Rv0954 | 3.545 | 0.0 |
| PonA1 | -1.154 | 0.0 |
| EccD1_KO | -1.151 | -0.921 |
| EspI_KO | -2.667 | -0.95 |
| PE35_KO | -2.981 | -2.45 |
| PPE68_KO | -2.857 | -2.451 |
| glycerol2 | -2.008 | -0.224 |
| lignocerate | -1.745 | -0.807 |
| oleate | -2.032 | -0.94 |
| phosphatidylcholine | -2.007 | -0.929 |
| acetate | -0.384 | -1.31 |
| glucAc | -1.481 | -0.815 |
| Rv0950ko | -2.268 | 0.289 |
| Rv1096ko | -2.045 | -0.477 |
| Rv3684ko | -0.547 | -0.701 |
| delta_otsA_trehalose | 0.366 | 0.103 |