Top 10 genes with highest correlation to Rv3802c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.4793) | info on Rv1348/irtA |
| Rv2474c/- | (cc=0.4448) | info on Rv2474c/- |
| Rv3874/esxB | (cc=0.4261) | info on Rv3874/esxB |
| Rv0757/phoP | (cc=0.4102) | info on Rv0757/phoP |
| Rv0753c/mmsA | (cc=0.4094) | info on Rv0753c/mmsA |
| Rv2063/mazE7 | (cc=0.4013) | info on Rv2063/mazE7 |
| Rv3265c/wbbL1 | (cc=0.3882) | info on Rv3265c/wbbL1 |
| Rv0758/phoR | (cc=0.3824) | info on Rv0758/phoR |
| Rv2392/cysH | (cc=0.376) | info on Rv2392/cysH |
| Rv2391/sirA | (cc=0.3757) | info on Rv2391/sirA |
Correlation of Rv3802c/- with Rv1348/irtA
Normalized LFCs for Rv3802c/-:
(description and provenance of datasets)
| Rv3802c/- | Rv1348/irtA | |
| Fe_supp_jason_reseq | 1.163 | 2.452 |
| low_pH_jason_reseq | 0.539 | 1.233 |
| NO_jason_reseq | -0.331 | -0.845 |
| B6_jason_reseq | -0.292 | -0.496 |
| MHCII_jason_reseq | 0.0 | -0.572 |
| Isoniazid02 | 0.156 | 0.156 |
| Rifampicin4 | -0.653 | 0.0 |
| Ethambutol3 | -0.293 | 0.0 |
| Meropenem3 | -0.289 | -0.138 |
| Vancomycin16 | 0.284 | -0.305 |
| Rv2680_day32 | -0.459 | -0.908 |
| H37Rv_KO_MarP | -1.696 | -1.123 |
| hypoxia_3wks | 0.502 | -0.502 |
| hypoxia_6wks | 0.263 | 0.0 |
| glycerol | 0.342 | -1.153 |
| cholesterol | 0.859 | -0.972 |
| AJ | -0.845 | -1.556 |
| Bibs02 | -1.015 | 0.446 |
| Bibs02c | -1.161 | -0.243 |
| BL6 | -0.569 | -0.839 |
| BL6a | -0.901 | -0.356 |
| BXD01 | -0.723 | -0.744 |
| BXD010 | -0.583 | -0.859 |
| BXD011 | -0.258 | -0.612 |
| BXD03 | -0.615 | -0.772 |
| BXD04 | -0.251 | -0.49 |
| BXD05 | -0.612 | -0.903 |
| BXD06 | -0.741 | -0.762 |
| BXD07 | -0.505 | -0.79 |
| BXD08 | -0.738 | -0.892 |
| BXD09 | -0.78 | -0.943 |
| CAST | -0.467 | -1.106 |
| CCcont | -0.679 | 0.49 |
| DS01 | -0.861 | 0.0 |
| DS02 | -0.441 | 0.435 |
| DS04 | -0.883 | -1.107 |
| DS0c | -0.987 | 0.53 |
| GP01 | 0.515 | -0.662 |
| GP02 | -0.233 | -0.558 |
| GP0c | 0.151 | -0.872 |
| NOD | -1.022 | -0.89 |
| NZO | -1.107 | -1.338 |
| PWK | -1.088 | -1.316 |
| H37Rv_KO_CtpC | -0.739 | -0.292 |
| H37Rv_KO_CtpD | -0.576 | -0.502 |
| H37Rv_KO_Rv1272 | -0.642 | -0.805 |
| H37Rv_KO_SugABC | -0.55 | -0.565 |
| H37Rv_KO_MbtN | -0.135 | -0.495 |
| Trans05 | -0.594 | -0.746 |
| macrophage_unactivated | -0.963 | -1.016 |
| IL1 | -1.163 | -0.297 |
| Rapamycin | -0.681 | -0.307 |
| Tcell | -0.994 | 0.0 |
| GMCSF | -1.281 | -1.545 |
| IFNab | -0.435 | -0.973 |
| IFNg | -0.187 | -1.195 |
| IFNg_GMCSF1 | -1.232 | -1.405 |
| Rv1432_day32 | 0.0 | -0.884 |
| Rv1565c_day32 | 0.415 | -0.351 |
| secA2_input | -1.237 | 0.0 |
| delta_Rv3594 | -0.702 | -0.967 |
| delta_Rv3717 | -1.432 | -1.881 |
| delta_Rv3811 | -1.692 | -1.557 |
| delta_Rv0954 | -0.842 | 0.226 |
| PonA1 | 0.402 | 0.621 |
| EccD1_KO | 1.365 | 0.474 |
| EspI_KO | -0.87 | 0.0 |
| PE35_KO | 0.898 | 1.779 |
| PPE68_KO | 0.0 | 0.883 |
| glycerol2 | 0.0 | -0.509 |
| lignocerate | 0.0 | -0.865 |
| oleate | 0.0 | -1.202 |
| phosphatidylcholine | 0.0 | -0.657 |
| acetate | 0.0 | 0.0 |
| glucAc | 0.0 | -0.176 |
| Rv0950ko | -0.302 | 0.609 |
| Rv1096ko | -0.621 | 0.416 |
| Rv3684ko | 0.861 | 0.452 |
| delta_otsA_trehalose | -0.254 | 0.294 |