Top 10 genes with highest correlation to Rv3768/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1208/gpgS | (cc=0.5368) | info on Rv1208/gpgS |
| Rv2470/glbO | (cc=0.5355) | info on Rv2470/glbO |
| Rv2847c/cysG | (cc=0.529) | info on Rv2847c/cysG |
| Rv2087/- | (cc=0.5282) | info on Rv2087/- |
| Rv2978c/- | (cc=0.5032) | info on Rv2978c/- |
| Rv3541c/- | (cc=0.4962) | info on Rv3541c/- |
| Rv1436/gap | (cc=0.4822) | info on Rv1436/gap |
| Rv2130c/mshC | (cc=0.4755) | info on Rv2130c/mshC |
| Rv0486/mshA | (cc=0.4692) | info on Rv0486/mshA |
| Rv2270/lppN | (cc=0.4685) | info on Rv2270/lppN |
Correlation of Rv3768/- with Rv2270/lppN
Normalized LFCs for Rv3768/-:
(description and provenance of datasets)
| Rv3768/- | Rv2270/lppN | |
| Fe_supp_jason_reseq | -0.077 | 0.71 |
| low_pH_jason_reseq | -0.494 | -0.323 |
| NO_jason_reseq | -1.599 | -0.318 |
| B6_jason_reseq | -0.377 | 0.63 |
| MHCII_jason_reseq | -0.274 | -0.077 |
| Isoniazid02 | 1.406 | -0.26 |
| Rifampicin4 | -0.523 | 0.401 |
| Ethambutol3 | 1.936 | -0.185 |
| Meropenem3 | 0.04 | 0.398 |
| Vancomycin16 | 0.146 | 0.096 |
| Rv2680_day32 | 0.386 | 0.184 |
| H37Rv_KO_MarP | 0.346 | 0.459 |
| hypoxia_3wks | 0.0 | -0.315 |
| hypoxia_6wks | 0.512 | -0.031 |
| glycerol | 0.189 | 0.553 |
| cholesterol | -0.079 | -0.164 |
| AJ | -0.062 | -0.629 |
| Bibs02 | -1.025 | -1.25 |
| Bibs02c | -0.429 | 0.638 |
| BL6 | 0.195 | -1.299 |
| BL6a | -0.281 | -0.033 |
| BXD01 | 0.473 | -0.933 |
| BXD010 | -0.718 | 0.595 |
| BXD011 | 0.256 | 0.081 |
| BXD03 | 1.1 | -1.289 |
| BXD04 | 0.714 | -0.581 |
| BXD05 | -0.233 | 0.086 |
| BXD06 | -0.217 | -0.435 |
| BXD07 | 0.449 | -0.222 |
| BXD08 | 0.325 | -0.931 |
| BXD09 | 0.282 | -0.184 |
| CAST | -0.522 | -0.324 |
| CCcont | 0.255 | -1.924 |
| DS01 | 0.021 | -0.058 |
| DS02 | -0.54 | -0.246 |
| DS04 | -1.511 | -0.505 |
| DS0c | -0.614 | -0.284 |
| GP01 | 0.255 | -0.614 |
| GP02 | 0.873 | -0.102 |
| GP0c | -0.634 | -0.734 |
| NOD | 0.714 | 0.805 |
| NZO | -0.474 | -0.964 |
| PWK | 0.966 | 0.033 |
| H37Rv_KO_CtpC | -1.359 | 0.104 |
| H37Rv_KO_CtpD | -0.093 | -0.251 |
| H37Rv_KO_Rv1272 | 0.521 | 0.998 |
| H37Rv_KO_SugABC | -0.131 | 0.159 |
| H37Rv_KO_MbtN | -0.046 | -0.597 |
| Trans05 | -0.814 | 0.103 |
| macrophage_unactivated | 0.297 | -0.376 |
| IL1 | -0.617 | 0.273 |
| Rapamycin | 0.921 | -0.761 |
| Tcell | -0.215 | -0.124 |
| GMCSF | 0.554 | -0.597 |
| IFNab | 0.063 | -0.057 |
| IFNg | 0.0 | 0.43 |
| IFNg_GMCSF1 | -0.104 | 0.346 |
| Rv1432_day32 | 0.691 | 0.621 |
| Rv1565c_day32 | -0.245 | -1.199 |
| secA2_input | -1.055 | -1.276 |
| delta_Rv3594 | 0.0 | 1.115 |
| delta_Rv3717 | 0.356 | 0.203 |
| delta_Rv3811 | 0.492 | 1.715 |
| delta_Rv0954 | -0.039 | 0.048 |
| PonA1 | 1.255 | -0.235 |
| EccD1_KO | 0.641 | 1.579 |
| EspI_KO | 1.149 | 1.845 |
| PE35_KO | 2.368 | 3.106 |
| PPE68_KO | 2.451 | 3.318 |
| glycerol2 | -0.723 | -1.544 |
| lignocerate | -0.201 | -2.176 |
| oleate | -0.912 | -1.198 |
| phosphatidylcholine | -0.584 | -1.751 |
| acetate | -0.678 | -2.622 |
| glucAc | -0.441 | -2.001 |
| Rv0950ko | 0.238 | 0.464 |
| Rv1096ko | 0.103 | -0.341 |
| Rv3684ko | 0.223 | -0.144 |
| delta_otsA_trehalose | 1.11 | 0.272 |