Top 10 genes with highest correlation to Rv3749c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2287/yjcE | (cc=0.8532) | info on Rv2287/yjcE |
Rv1913/- | (cc=0.8224) | info on Rv1913/- |
Rv0293c/- | (cc=0.7675) | info on Rv0293c/- |
Rv1356c/- | (cc=0.7432) | info on Rv1356c/- |
Rv0182c/sigG | (cc=0.7014) | info on Rv0182c/sigG |
Rv3812/PE_PGRS62 | (cc=0.6826) | info on Rv3812/PE_PGRS62 |
Rv2668/- | (cc=0.6646) | info on Rv2668/- |
Rv0187/- | (cc=0.6288) | info on Rv0187/- |
Rv3697c/vapC48 | (cc=0.6188) | info on Rv3697c/vapC48 |
Rv1366/- | (cc=0.6056) | info on Rv1366/- |
Correlation of Rv3749c/- with Rv2668/-
Normalized LFCs for Rv3749c/-:
(description and provenance of datasets)
Rv3749c/- | Rv2668/- | |
Fe_supp_jason_reseq | 0.253 | -1.182 |
low_pH_jason_reseq | -0.602 | -0.391 |
NO_jason_reseq | 0.026 | 0.076 |
B6_jason_reseq | 0.466 | -0.461 |
MHCII_jason_reseq | 0.688 | -1.006 |
Isoniazid02 | -0.227 | 0.349 |
Rifampicin4 | 0.062 | 0.804 |
Ethambutol3 | 0.136 | 0.773 |
Meropenem3 | -0.904 | -0.295 |
Vancomycin16 | -0.464 | 0.788 |
Rv2680_day32 | -0.008 | -1.115 |
H37Rv_KO_MarP | 0.429 | 0.127 |
hypoxia_3wks | -0.1 | -0.231 |
hypoxia_6wks | -0.098 | -0.428 |
glycerol | -2.336 | 1.096 |
cholesterol | -1.456 | -1.433 |
AJ | 0.225 | 0.182 |
Bibs02 | -0.535 | -0.119 |
Bibs02c | 0.779 | -1.234 |
BL6 | -0.411 | 0.61 |
BL6a | 0.532 | -0.11 |
BXD01 | -0.171 | -0.44 |
BXD010 | 0.558 | -0.62 |
BXD011 | -0.294 | 0.141 |
BXD03 | -0.054 | 0.193 |
BXD04 | -0.348 | -0.057 |
BXD05 | 0.359 | 0.57 |
BXD06 | -0.489 | -0.087 |
BXD07 | -0.021 | -0.103 |
BXD08 | -0.206 | 0.221 |
BXD09 | -0.101 | 0.074 |
CAST | 0.354 | -1.587 |
CCcont | -0.373 | 0.77 |
DS01 | -0.101 | -1.11 |
DS02 | -0.487 | 0.882 |
DS04 | -0.521 | 0.135 |
DS0c | 0.193 | -0.336 |
GP01 | 1.065 | -2.044 |
GP02 | -0.271 | -1.017 |
GP0c | -0.257 | -0.767 |
NOD | 0.716 | -0.703 |
NZO | 0.077 | -1.445 |
PWK | 0.175 | -0.787 |
H37Rv_KO_CtpC | -0.755 | -0.548 |
H37Rv_KO_CtpD | -0.643 | -2.086 |
H37Rv_KO_Rv1272 | -0.229 | -0.234 |
H37Rv_KO_SugABC | -0.009 | -1.183 |
H37Rv_KO_MbtN | -1.433 | -0.675 |
Trans05 | -0.542 | -0.834 |
macrophage_unactivated | -1.386 | -0.129 |
IL1 | -5.09 | -1.498 |
Rapamycin | -4.944 | -3.069 |
Tcell | 2.366 | 3.982 |
GMCSF | -4.267 | -4.399 |
IFNab | -4.734 | -4.577 |
IFNg | -4.479 | -4.22 |
IFNg_GMCSF1 | -5.144 | -5.442 |
Rv1432_day32 | 0.077 | -1.156 |
Rv1565c_day32 | 0.18 | -1.93 |
secA2_input | -0.941 | 0.64 |
delta_Rv3594 | -0.393 | -0.572 |
delta_Rv3717 | -0.339 | -1.062 |
delta_Rv3811 | -0.082 | -0.242 |
delta_Rv0954 | 0.141 | 0.213 |
PonA1 | -0.029 | -0.357 |
EccD1_KO | -0.428 | 1.036 |
EspI_KO | -0.034 | 0.034 |
PE35_KO | -0.604 | -0.607 |
PPE68_KO | -0.877 | -0.49 |
glycerol2 | 0.901 | -1.093 |
lignocerate | 0.793 | 0.6 |
oleate | 0.906 | -1.038 |
phosphatidylcholine | 1.018 | -0.101 |
acetate | 0.318 | 0.464 |
glucAc | 0.22 | 0.571 |
Rv0950ko | 0.356 | -0.305 |
Rv1096ko | 0.425 | 1.641 |
Rv3684ko | -0.016 | 0.599 |
delta_otsA_trehalose | 1.092 | 0.815 |