Top 10 genes with highest correlation to Rv3749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2287/yjcE | (cc=0.8532) | info on Rv2287/yjcE |
| Rv1913/- | (cc=0.8224) | info on Rv1913/- |
| Rv0293c/- | (cc=0.7675) | info on Rv0293c/- |
| Rv1356c/- | (cc=0.7432) | info on Rv1356c/- |
| Rv0182c/sigG | (cc=0.7014) | info on Rv0182c/sigG |
| Rv3812/PE_PGRS62 | (cc=0.6826) | info on Rv3812/PE_PGRS62 |
| Rv2668/- | (cc=0.6646) | info on Rv2668/- |
| Rv0187/- | (cc=0.6288) | info on Rv0187/- |
| Rv3697c/vapC48 | (cc=0.6188) | info on Rv3697c/vapC48 |
| Rv1366/- | (cc=0.6056) | info on Rv1366/- |
Correlation of Rv3749c/- with Rv0293c/-
Normalized LFCs for Rv3749c/-:
(description and provenance of datasets)
| Rv3749c/- | Rv0293c/- | |
| Fe_supp_jason_reseq | 0.253 | -0.213 |
| low_pH_jason_reseq | -0.602 | 0.351 |
| NO_jason_reseq | 0.026 | -0.263 |
| B6_jason_reseq | 0.466 | 0.243 |
| MHCII_jason_reseq | 0.688 | 0.673 |
| Isoniazid02 | -0.227 | 0.359 |
| Rifampicin4 | 0.062 | -0.097 |
| Ethambutol3 | 0.136 | -0.044 |
| Meropenem3 | -0.904 | 1.803 |
| Vancomycin16 | -0.464 | 0.032 |
| Rv2680_day32 | -0.008 | -0.307 |
| H37Rv_KO_MarP | 0.429 | 0.119 |
| hypoxia_3wks | -0.1 | 1.248 |
| hypoxia_6wks | -0.098 | 0.94 |
| glycerol | -2.336 | 0.0 |
| cholesterol | -1.456 | -0.302 |
| AJ | 0.225 | 0.435 |
| Bibs02 | -0.535 | -0.207 |
| Bibs02c | 0.779 | 0.379 |
| BL6 | -0.411 | 0.6 |
| BL6a | 0.532 | 0.733 |
| BXD01 | -0.171 | 0.381 |
| BXD010 | 0.558 | 0.375 |
| BXD011 | -0.294 | 0.891 |
| BXD03 | -0.054 | 0.827 |
| BXD04 | -0.348 | 0.619 |
| BXD05 | 0.359 | 1.087 |
| BXD06 | -0.489 | 0.816 |
| BXD07 | -0.021 | 0.748 |
| BXD08 | -0.206 | 0.699 |
| BXD09 | -0.101 | 0.66 |
| CAST | 0.354 | 0.319 |
| CCcont | -0.373 | 0.527 |
| DS01 | -0.101 | -0.354 |
| DS02 | -0.487 | -0.072 |
| DS04 | -0.521 | 0.493 |
| DS0c | 0.193 | -0.206 |
| GP01 | 1.065 | -0.102 |
| GP02 | -0.271 | -0.042 |
| GP0c | -0.257 | -0.771 |
| NOD | 0.716 | 0.628 |
| NZO | 0.077 | 0.049 |
| PWK | 0.175 | 0.141 |
| H37Rv_KO_CtpC | -0.755 | -0.661 |
| H37Rv_KO_CtpD | -0.643 | 0.505 |
| H37Rv_KO_Rv1272 | -0.229 | 0.394 |
| H37Rv_KO_SugABC | -0.009 | 0.165 |
| H37Rv_KO_MbtN | -1.433 | -0.313 |
| Trans05 | -0.542 | 0.358 |
| macrophage_unactivated | -1.386 | 0.253 |
| IL1 | -5.09 | -2.619 |
| Rapamycin | -4.944 | -2.332 |
| Tcell | 2.366 | 2.441 |
| GMCSF | -4.267 | -1.143 |
| IFNab | -4.734 | -2.276 |
| IFNg | -4.479 | -1.994 |
| IFNg_GMCSF1 | -5.144 | -2.724 |
| Rv1432_day32 | 0.077 | -0.111 |
| Rv1565c_day32 | 0.18 | 0.406 |
| secA2_input | -0.941 | -0.246 |
| delta_Rv3594 | -0.393 | 1.26 |
| delta_Rv3717 | -0.339 | 0.395 |
| delta_Rv3811 | -0.082 | 1.142 |
| delta_Rv0954 | 0.141 | 1.162 |
| PonA1 | -0.029 | 0.926 |
| EccD1_KO | -0.428 | 0.194 |
| EspI_KO | -0.034 | 0.074 |
| PE35_KO | -0.604 | -0.076 |
| PPE68_KO | -0.877 | 0.419 |
| glycerol2 | 0.901 | 0.073 |
| lignocerate | 0.793 | 0.457 |
| oleate | 0.906 | -0.089 |
| phosphatidylcholine | 1.018 | 0.535 |
| acetate | 0.318 | 0.274 |
| glucAc | 0.22 | 0.096 |
| Rv0950ko | 0.356 | 0.552 |
| Rv1096ko | 0.425 | 0.136 |
| Rv3684ko | -0.016 | 1.1 |
| delta_otsA_trehalose | 1.092 | -0.297 |